Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
brca_synergy
cdk7-analysis
cluequery
An R interface to the Connectivity Map API at clue.io
fm.index
synExtra
Extension of `synapser`, a Synapse R client developed by Sage Bionetworks
morgancpp
Efficient structure for storing and comparing Morgan fingerprints
ordinalRidge
Fast solver for ordinal logistic regression with a ridge penalty
quantification
Quantification module for mcmicro
sms-maintenance
Scripts for maintaining and processing Small Molecule Suite data.
clemenshug's Repositories
clemenshug/brca_synergy
clemenshug/fm.index
clemenshug/cdk7-analysis
clemenshug/cellcutter
clemenshug/cluequery
An R interface to the Connectivity Map API at clue.io
clemenshug/dge_comparison
Comparison of digital gene expression (DGE) and bulk RNA-seq
clemenshug/synExtra
Extension of `synapser`, a Synapse R client developed by Sage Bionetworks
clemenshug/celltide
clemenshug/curl
A Modern and Flexible Web Client for R
clemenshug/DaPars2
Dynamics analysis of Alternative PolyAdenylation from RNA-seq
clemenshug/DRIAD
Drug Repurposing in Alzheimer's Disease
clemenshug/drug_similarity
Implement and combine multiple different methods of computing drug similarity.
clemenshug/dsRID
clemenshug/erk_senescence
clemenshug/Fooocus
Focus on prompting and generating
clemenshug/gitcreds
Query git credentials from R (experimental)
clemenshug/mcmicro
Multiple-choice microscopy pipeline
clemenshug/Melanoma_BMAL1_Plasticity
This repository includes all of the codes used for image processing, single cell analysis, and spatial analysis for this collaboration
clemenshug/morgancpp
Efficient structure for storing and comparing Morgan fingerprints
clemenshug/ord-work
Workspace for ordinalRidge
clemenshug/ordinalRidge
Fast solver for ordinal logistic regression with a ridge penalty
clemenshug/PartSeg
Tool for segmentation in bioimaging
clemenshug/PythonEmbedInR
Based off of PythonInR (https://bitbucket.org/Floooo/pythoninr/) but includes a standalone, compiled from source python instead of relying on the python installed on the host machine
clemenshug/quantification
Quantification module for mcmicro
clemenshug/rdkit
The official sources for the RDKit library
clemenshug/REDItools2
clemenshug/rnaseq
Guide for aligning deep RNAseq and Digital Gene Expression (DGE) reads using bcbio.
clemenshug/shiny
Easy interactive web applications with R
clemenshug/yardstick
Tidy methods for measuring model performance
clemenshug/yonder
A reactive web framework built on shiny