Pinned Repositories
16sPrimersByPhyla
Uses GreenGenes 16S rDNA to evaluate biases in "universal" bacterial primers
2014
2016_house_elections
My ill-fated and last-minute attempt to predict House elections
board_game_website
An online version of the board game Sun Tzu (which is a.k.a. Dynasties, I think).
cbbl
A script to download all the cbbl genes from NCBI nucleotide database, and output as a fasta
d3.js-phylogeny
A d3/javascript based program for plotting newick trees, specifically demonstrated with the Eukaryotic tree of life
FinalProject
Final Project Code and Data
HYDEN_copy
A program to design highly degenerate PCR primers
satellite_game
A game where you try and guess what city you're looking at in a satellite photo.
sport_season_lengths
The NBA really doesn't need 82 game seasons.
cmerenstein's Repositories
cmerenstein/HYDEN_copy
A program to design highly degenerate PCR primers
cmerenstein/16sPrimersByPhyla
Uses GreenGenes 16S rDNA to evaluate biases in "universal" bacterial primers
cmerenstein/2016_house_elections
My ill-fated and last-minute attempt to predict House elections
cmerenstein/board_game_website
An online version of the board game Sun Tzu (which is a.k.a. Dynasties, I think).
cmerenstein/d3.js-phylogeny
A d3/javascript based program for plotting newick trees, specifically demonstrated with the Eukaryotic tree of life
cmerenstein/FinalProject
Final Project Code and Data
cmerenstein/satellite_game
A game where you try and guess what city you're looking at in a satellite photo.
cmerenstein/sport_season_lengths
The NBA really doesn't need 82 game seasons.
cmerenstein/2023_mask_study
cmerenstein/2024_CLAD_microbiome
cmerenstein/CIS_519_final_project_scripts
cmerenstein/COVID19NetworkSimulations
Public repository for stochastic network simulations of COVID19 dynamics
cmerenstein/covid_microbiome_2021
cmerenstein/Deep_Clustering_TCGA_LUSC
Deep clustering of TCGA Lung Squamous FFPE histology slides
cmerenstein/fantasy_playoff_odds
cmerenstein/functional_diversity
cmerenstein/GCB535
Materials for GCB535 at Penn.
cmerenstein/HW-0
HW submission exercise.
cmerenstein/HW-1
2011 Houston Flight Data
cmerenstein/HW-2
Mulitple Regression and EDA
cmerenstein/HW-3
Logistic Regression and Dates & Times
cmerenstein/HW-4
GIS/Shapefiles, Census Data, Leaflet Interactive Maps, and Shiny Interactive Apps.
cmerenstein/HW-5
Shiny App, Basic Text Mining
cmerenstein/katie_metabolite_for_code_review
cmerenstein/nhl_points_expected
nothing to see here
cmerenstein/nhl_streaks
cmerenstein/RNA_Seq
Nextflow pipeline for preprocessing RNA sequencing data.
cmerenstein/starting_pitchers
A model to predict how many more runs a starter will give up
cmerenstein/synthpops
Create synthetic populations for COVID-19 epidemic analyses.
cmerenstein/Vaccine_Inequity_Philadelphia