centre for mathematical modelling of infectious diseases
London School of Hygiene & Tropical Medicine
London
Pinned Repositories
cmmid.github.io
covid-age
Analysis code and data for COVID-19 age-specific clinical fraction
covid-uk
Scenario analyses for COVID-19 outbreak in the United Kingdom
CovidGlobalNow
Temporal variation in transmission during the COVID-19 outbreak
CovidItalyNow
Temporal variation in transmission in Italy during the COVID-19 outbreak
covidm_reports
LMIC reports using the covidm model framework
hhh4-workshop
Workshop on hhh4 and the endemic-epidemic framework
pcr-profile
ringbp
SA2UK
centre for mathematical modelling of infectious diseases's Repositories
cmmid/covid-uk
Scenario analyses for COVID-19 outbreak in the United Kingdom
cmmid/ringbp
cmmid/cmmid.github.io
cmmid/covid-age
Analysis code and data for COVID-19 age-specific clinical fraction
cmmid/hhh4-workshop
Workshop on hhh4 and the endemic-epidemic framework
cmmid/covidm_reports
LMIC reports using the covidm model framework
cmmid/pcr-profile
cmmid/SA2UK
cmmid/CovidItalyNow
Temporal variation in transmission in Italy during the COVID-19 outbreak
cmmid/CovidGlobalNow
Temporal variation in transmission during the COVID-19 outbreak
cmmid/screening_outbreak_delay
cmmid/SoftwareChatter
Software engineering discussion group resources
cmmid/quar_test_contact_tracing
cmmid/vaxco
cmmid/epinow2_hpcarray
used for R estimation supporting covidm_reports repository analysis
cmmid/mtm
workspace for MTM networks revision
cmmid/MTM-2023
MTM material, 2023 (package) version
cmmid/paramix
a package for aggregating parameters and disaggregating outcomes from compartmental models
cmmid/uk_movement_communities_covid
Repository of code for the publication: "Detecting behavioural changes in human movement to inform the spatial scale of interventions against COVID-19." Gibbs et al. 2021.
cmmid/colocation_dashboard_cmmid
Interactive dashboard of Facebook colocation data
cmmid/coronavirus_immunity
code for paper - fitting seasonal coronavirus and simulating covid
cmmid/covid_quar_test_import_risk
cmmid/uk_fb_population_estimation
Repository for source code to estimate population changes in the UK with Facebook population data
cmmid/covidTestVac
cmmid/pcr_entry_screening_eurosurv
cmmid/travel_screening_strategies