cnellington
Computational Biology PhD Student, Carnegie Mellon University
Carnegie Mellon UniversityPittsburgh, PA
Pinned Repositories
AI4Bio-Reading-List
Must-read papers on AI for Biology
AsynchronousBLASTWebApp
A simple React-Django webapp to query DNA sequences against a databank of .fasta files
BIGGDATA-Stats-Modules
Antibody Cluster Analytics
bioscience-python-tutorials
A series of tutorials to introduce bioscience students to a variety of python-based research applications. UW Bioengineering 2019-2020 honors project
CMU-CellSystems-Final
Birth-death models for modeling evolution in finite populations
CMU-Genomics-Final
Modeling cancer evolution from spatial transcriptomics data
Contextualized
An SKLearn-style toolbox for estimating and analyzing models, distributions, and functions with context-specific parameters.
DataGPT
A wrapper for the prompt-debug-plot workflow of data science with GPT
notears-tensorflow2
Reimplementation of NOTEARS in Tensorflow
SampleSpecificDAGs
Framework for estimating the structures and parameters of Bayesian networks (DAGs) at per-sample resolution
cnellington's Repositories
cnellington/BIGGDATA-Stats-Modules
Antibody Cluster Analytics
cnellington/RegistrationBot
Script that automatically opens UW registration when classes are available
cnellington/reptiles
A second attempt. Now with Lizards!
cnellington/String-Genetic-Algorithm
Java experiment with simple genetic algorithms.
cnellington/Trident