Pinned Repositories
cookiecutter-napari-plugin
Cookiecutter for napari plugins
deep-finder
[THIS IS CURRENTLY ONLY A FORK DEDICATED TO napari-deepinder] Deep Finder is an original deep learning approach to localize macromolecules in cryo electron tomography images. The method is based on image segmentation using a 3D convolutional neural network.
Deformation-Segmentation
PyTorch implementation of Learning to Downsample for Segmentation of Ultra-High Resolution Images
EarthParserDataset
genBoxes
Generate simple synthetic 3D point clouds
ISDNet
LearnableEarthParser
napari
napari: a fast, interactive, multi-dimensional image viewer for python
napari-deepfinder
A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.
napari-deepfinder
A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.
cnstt's Repositories
cnstt/cookiecutter-napari-plugin
Cookiecutter for napari plugins
cnstt/deep-finder
[THIS IS CURRENTLY ONLY A FORK DEDICATED TO napari-deepinder] Deep Finder is an original deep learning approach to localize macromolecules in cryo electron tomography images. The method is based on image segmentation using a 3D convolutional neural network.
cnstt/Deformation-Segmentation
PyTorch implementation of Learning to Downsample for Segmentation of Ultra-High Resolution Images
cnstt/EarthParserDataset
cnstt/genBoxes
Generate simple synthetic 3D point clouds
cnstt/ISDNet
cnstt/LearnableEarthParser
cnstt/napari
napari: a fast, interactive, multi-dimensional image viewer for python
cnstt/napari-deepfinder
A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.
cnstt/napari-stracking
Napari plugin for particles tracking
cnstt/omnipose
Repository for the Omnipose package and associated scripts for the paper.