colehurwitz
Postdoctoral researcher at Zuckerman Institute. PhD from University of Edinburgh. Building models for neural data analysis.
University of EdinburghEdinburgh, Scotland
Pinned Repositories
akashgit.github.io
decay_model
Implementation and examples for the NeurIPS 2019 manuscript: Scalable Spike Source Localization in Extracellular Recordings using Amortized Variational Inference
ERSS
A tool for creating biophysically realistic extracellular recording sites given a specific probe geometry and brain region
IBL_foundation_model
IBL foundation model
llm_bci
LLMs for speech decoding
NeurIPS_Poster
Poster for "Scalable Spike Source Localization in Extracellular Recordings using Amortized Variational Inference"
tracking-diagnostics
A collection of tools for assessing the performance of pose estimation algorithms
eks
Ensembling and kalman smoothing for pose estimation
spikeextractors
Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.
spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
colehurwitz's Repositories
colehurwitz/IBL_foundation_model
IBL foundation model
colehurwitz/decay_model
Implementation and examples for the NeurIPS 2019 manuscript: Scalable Spike Source Localization in Extracellular Recordings using Amortized Variational Inference
colehurwitz/ERSS
A tool for creating biophysically realistic extracellular recording sites given a specific probe geometry and brain region
colehurwitz/llm_bci
LLMs for speech decoding
colehurwitz/NeurIPS_Poster
Poster for "Scalable Spike Source Localization in Extracellular Recordings using Amortized Variational Inference"
colehurwitz/tracking-diagnostics
A collection of tools for assessing the performance of pose estimation algorithms
colehurwitz/akashgit.github.io
colehurwitz/colehurwitz.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
colehurwitz/DetectionAnalysis
Basic script and functions for evaluating a detection algorithm on MEArec ground truth recording files
colehurwitz/dsvae
colehurwitz/dsvae_experiments
DSVAE experiments
colehurwitz/ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
colehurwitz/examples
A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.
colehurwitz/mayavi
3D visualization of scientific data in Python
colehurwitz/ml_ms4alg
MountainSort v4
colehurwitz/overlapnet
colehurwitz/pykilosort
WIP: Python port of Kilosort2
colehurwitz/pyqtgraph
Fast data visualization and GUI tools for scientific / engineering applications
colehurwitz/pytorch-lightning
The lightweight PyTorch wrapper for ML researchers. Scale your models. Write less boilerplate
colehurwitz/pytorch3d
PyTorch3D is FAIR's library of reusable components for deep learning with 3D data
colehurwitz/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
colehurwitz/tndm