Pinned Repositories
RESCRIPt
REference Sequence annotation and CuRatIon Pipeline
website
:musical_keyboard: :violin: Camerata Musica website
2017_plasmid_prediction_review
Contains code that is part of the plasmid prediction review (2017)
atlas
:earth_americas: ATLAS - workflows for assembly, annotation, and genomic binning of metagenomic and metatranscriptomic data.
bernstein-2016-productivity-and-diversity
Paper in preparation
bioconda-recipes
Conda recipes for the bioconda channel.
unite-train
🍄 Qiime2 ITS classifiers for the UNITE database
brislawn-2018-founders-species
🦠 📓 a microbiome paper
hundo
:100: Snakemake-based amplicon processing protocol for 16S and ITS sequences.
q2-vsearch
vsearch plugin for QIIME 2
colinbrislawn's Repositories
colinbrislawn/unite-train
🍄 Qiime2 ITS classifiers for the UNITE database
colinbrislawn/2017_plasmid_prediction_review
Contains code that is part of the plasmid prediction review (2017)
colinbrislawn/bioconda-recipes
Conda recipes for the bioconda channel.
colinbrislawn/q2-vsearch
vsearch plugin for QIIME 2
colinbrislawn/colinbrislawn.github.io
A small website
colinbrislawn/conda-forge-pinning-feedstock
A conda-smithy repository for conda-forge-pinning.
colinbrislawn/fastspar
Rapid and scalable correlation estimation for compositional data
colinbrislawn/gemelli
Gemelli is a tool box for running Robust Aitchison PCA (RPCA), Joint Robust Aitchison PCA (Joint-RPCA), TEMPoral TEnsor Decomposition (TEMPTED), and Compositional Tensor Factorization (CTF) on sparse compositional omics datasets.
colinbrislawn/gigabase-gigabyte
colinbrislawn/hundo
:bar_chart: Snakemake-based amplicon processing protocol for 16S and ITS sequences.
colinbrislawn/interesting-blaseball-games
A Python command line utility for exploring blaseball games. https://pypi.org/project/interesting-blaseball-games/
colinbrislawn/memdocs
Enable Public Contributions
colinbrislawn/microsoft-365-docs
This repo is used to host the source for the Microsoft 365 documentation on https://docs.microsoft.com.
colinbrislawn/mock-sequences
Mock community sequenced in three separate sequencing runs (MiSeq fastq files)
colinbrislawn/mykeys
colinbrislawn/pelican-themes
Themes for pelican
colinbrislawn/q2-composition
colinbrislawn/q2-forums
colinbrislawn/q2-types
colinbrislawn/r-git2r-feedstock
A conda-smithy repository for r-git2r.
colinbrislawn/r-nloptr-feedstock
A conda-smithy repository for r-nloptr.
colinbrislawn/r-xml2-feedstock
A conda-smithy repository for r-xml2.
colinbrislawn/RESCRIPt
REference Sequence annotation and CuRatIon Pipeline
colinbrislawn/Slankey_Blaseball_Team_Timelines
A visualiser for Blaseball teams over time as a Sankey plot, using Python, the Plotly library and the SIBR Datablase
colinbrislawn/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
colinbrislawn/snakemake-github-action
A Github action for running a Snakemake workflow
colinbrislawn/srfax-api-python
SRFax API for Python
colinbrislawn/sso-wall-of-shame
A list of vendors that treat single sign-on as a luxury feature, not a core security requirement.
colinbrislawn/trelliscope-examples
colinbrislawn/vsearch-data
Test data for vsearch