Common Workflow Language Lab

Experimental, unofficial, repositories of CWL community members

Pinned Repositories

cwl-cpp-auto
Autogenerated C++ bindings for CWL
Language:C++2 5 32
cwl-d-auto
Autogenerated classes for reading and writing CWL objects using the D language
Language:Common Workflow Language3 5 00
cwl-ex
CWL experimental grammar
Language:JavaScript11 4 30
cwl-ts-auto
Autogenerated TypeScript bindings for CWL
Language:TypeScript6 10 144
CWLDotNet
Autogenerated .Net bindings for CWL
Language:C#2 3 10
gxargparse
Automated CWL and Galaxy XML generation for Python tools that use argparse and click
Language:Python11 6 191
ipython2cwl
IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.
Language:Python17 5 57
python-cwlgen
Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
Language:Python29 36 1612
wdl-cwl-translator
A translator from WDL to CWL v1.2
Language:Common Workflow Language27 7 767
wdl2cwl
[Experimental] Workflow Definition Language (WDL) to CWL
Language:Python28 46 54

Common Workflow Language Lab's Repositories

common-workflow-lab/python-cwlgen
Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
Language:Python29 36 1612
common-workflow-lab/wdl2cwl
[Experimental] Workflow Definition Language (WDL) to CWL
Language:Python28 46 54
common-workflow-lab/wdl-cwl-translator
A translator from WDL to CWL v1.2
Language:Common Workflow Language27 7 767
common-workflow-lab/ipython2cwl
IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.
Language:Python17 5 57
common-workflow-lab/cwl-ex
CWL experimental grammar
Language:JavaScript11 4 30
common-workflow-lab/cwl2script
Compile CWL workflow to shell script
Language:Python10 6 25
common-workflow-lab/galaxy
Fork of Galaxy (http://galaxyproject.org/) attempting to implement the CWL spec.
Language:Python10 8 1112
common-workflow-lab/cwl-ts-auto
Autogenerated TypeScript bindings for CWL
Language:TypeScript6 10 144
common-workflow-lab/cwl-d-auto
Autogenerated classes for reading and writing CWL objects using the D language
Language:Common Workflow Language3 5 00
common-workflow-lab/cwl-language-server
A Language Server for CWL
Language:Python3 34 32
common-workflow-lab/2020-covid-19-bh
Coordinating the CWL workflow related to the 2020 COVID-19 BioHackathon
Language:Common Workflow Language2 4 43
common-workflow-lab/cwl-cpp-auto
Autogenerated C++ bindings for CWL
Language:C++2 5 32
common-workflow-lab/cwl-intermediate-tutorial
Language:HTML2 5 43
common-workflow-lab/CWLDotNet
Autogenerated .Net bindings for CWL
Language:C#2 3 10
common-workflow-lab/CW22_CWL_Novice_Exercises
CWL Novice Exercises for the Collaborations Workshop 2022
Language:HTML1 0 0
common-workflow-lab/cwl-advanced-training
Language:Common Workflow Language1 6 0
common-workflow-lab/cwl-argo-misc
Examples of CWL descriptions converted to Argo
1 10 1
common-workflow-lab/cwl-novice-tutorial-data
1 10 01
common-workflow-lab/run-tests
Action for running tests for CWL workflows
1 9 0
common-workflow-lab/.github
2 0
common-workflow-lab/2020-works-workshop-mpi-cwl
Language:TeX2 0
common-workflow-lab/avro
Mirror of Apache Avro
Language:Java37 01
common-workflow-lab/cwl-novice-tutorial
Placeholder repo for redirects to https://github.com/carpentries-incubator/cwl-novice-tutorial
4 0
common-workflow-lab/cwl_rna_seq
A very basic CWL RNA-Seq workflow using Kallisto
Language:Common Workflow Language1 0
common-workflow-lab/lwcwl
Lightweight CWL
Language:Python6 0
common-workflow-lab/make2cwl
Sketch of a GNU Make to CWL converter
1 2
common-workflow-lab/reana-demo-bsm-search
REANA example - BSM search
Language:Python1 0
common-workflow-lab/run-conformance-tests
Action for running CWL conformance tests
8 1
common-workflow-lab/schema-salad-ts-auto
Autogenerated TypeScript bindings for Schema SALAD documents
Language:TypeScript4 0
common-workflow-lab/upload-conformance-badges
Action for uploading CWL conformance badges
9 0