singularity container missing package optparse

[JHYSiu]

Hi

This may be incompetency on my part, but optparse package seems to be missing from the singularity container?

I pulled it from singularity pull docker://campbio/sctk_qc:2.10.1 today

I was testing if I could mount it with the following: singularity run -B /user/project_name/:/user/project_name/ /user/project_name/packages/singleCellTK/sctk_qc_2.10.1.sif (I tried with another container and that mounted fine)

I'm unable to run it due to the missing optparse package. (other packages such as singleCellTK load fine)

[mingl1997]

Hello,

We are in the process of releasing a new version and docker that will fix this issue.