Segmentation fault due to N containing transcripts

[abs-yy]

Hi, big thanks for the great software!
I've been trying out RATTLE for my cDNA-Seq ONT reads (corrected with TranscriptClean) and kept getting segmentation fault (core dumped) in a subset of the reads. The problem was that several reads contained N's, probably from the TranscriptClean correction. Removing these reads resulted in a complete run.
Would it be able to raise some kind of error when the reads contain N's?

[eileen-xue]

Hi,

We provide an update to show an error message when reads contain N's.

Please let us know if there are any questions.

Thanks,
Eileen

[abs-yy]

Hi Eileen,
Thanks for the swift update!