Pinned Repositories
Phase1.1NeuroRCode
Association of COVID-19 and Neurological Phenotypes
Phase1.1SqlDataExtraction
Phase2.1DataRPackage
Phase2.1DockerAnalysis
Phase2.1MissingRPackage
Phase2.1SqlDataExtraction
SQL code to generate Phase 2.1 CSV files
Phase2.1UtilitiesRPackage
R utility functions for Phase 2.1 of the 4CE Consortium
PhaseX.2SqlDataExtraction
SQL and documentation to extract 4CE Phase 1.2 and 2.2 data files.
visualization-notebooks
Jupyter Notebooks and other code for 4CE data visualizations.
website
Repository for covidclinical.net website.
4CE's Repositories
covidclinical/visualization-notebooks
Jupyter Notebooks and other code for 4CE data visualizations.
covidclinical/Phase2.1DockerAnalysis
covidclinical/PhaseX.2SqlDataExtraction
SQL and documentation to extract 4CE Phase 1.2 and 2.2 data files.
covidclinical/Phase2.1DataRPackage
covidclinical/Phase1.1SqlDataExtraction
covidclinical/Phase2.1SqlDataExtraction
SQL code to generate Phase 2.1 CSV files
covidclinical/website
Repository for covidclinical.net website.
covidclinical/Phase1.2PASCAnalysisRScript
covidclinical/Phase2.1AKIRPackage
R Package to run statistical analyses for COVID-19 patients with acute kidney injury.
covidclinical/Phase2.1ardsRPackage
covidclinical/Phase2.1MissingRPackage
covidclinical/Phase2.1NeuroAnalysis
Analysis of "Neurological diagnoses in hospitalized COVID-19 patients associated with adverse outcomes: a multinational cohort study"
covidclinical/Phase2.1NeuroRPackage
R Package to run statistical analyses for COVID-19 patients with neurological conditions.
covidclinical/Phase2.1NeuroRSummaries
Analysis of "Neurological diagnoses in hospitalized COVID-19 patients associated with adverse outcomes: a multinational cohort study"
covidclinical/Phase2.1SeverityAugRPackage
covidclinical/Phase2.2.bacterial_infections
Analysis of the bacterial infections trends in the children population
covidclinical/Phase2.2.psy_peds_trends
covidclinical/Phase2.2MISCRPackage
covidclinical/PhaseX.2QualityControlRpackage
Generate QC reports for 4CE phase 1.2 and phase 2.2 data
covidclinical/Version3SqlDataExtraction
SQL and documentation to extract 4CE Version 3 local patient-level and shared aggregate files.
covidclinical/ARDS_aggregated_data_Public
covidclinical/Phase1.2QualityControlRpackage
covidclinical/Phase2.1AdmittedForCovidRPackage
covidclinical/Phase2.1SurvivalRPackage
covidclinical/Phase2.2.kawasaki_ad
covidclinical/Phase2.2.MISC
covidclinical/Phase2.2.peds_temporalTrends
Temporal trends of distinct phenotypes before and during pandemic in children
covidclinical/Phase2.2CovidEmbeddingRPackage
covidclinical/Phase2.2NeuroPasc
covidclinical/Phase2.2PASCcondIRPackage
This package implements conditional independence testing procedures to identify codified concepts related to prior exposure to SARS-CoV-2 in 4CE Phase2.2 Data.