4CE

Consortium for Clinical Characterization of COVID-19 by EHR

Earth

Pinned Repositories

Phase1.1NeuroRCode
Association of COVID-19 and Neurological Phenotypes
Language:R4 7 11
Phase1.1SqlDataExtraction
3 7 22
Phase2.1DataRPackage
Language:R5 9 18
Phase2.1DockerAnalysis
Language:Dockerfile7 8 144
Phase2.1NeuroRPackage
R Package to run statistical analyses for COVID-19 patients with neurological conditions.
Language:R3 7 05
Phase2.1SqlDataExtraction
SQL code to generate Phase 2.1 CSV files
Language:TSQL3 7 04
Phase2.1UtilitiesRPackage
R utility functions for Phase 2.1 of the 4CE Consortium
Language:R3 7 02
PhaseX.2SqlDataExtraction
SQL and documentation to extract 4CE Phase 1.2 and 2.2 data files.
Language:PLpgSQL6 7 06
visualization-notebooks
Jupyter Notebooks and other code for 4CE data visualizations.
Language:Jupyter Notebook13 12 44
website
Repository for covidclinical.net website.
Language:HTML3 6 24

4CE's Repositories

covidclinical/visualization-notebooks
Jupyter Notebooks and other code for 4CE data visualizations.
Language:Jupyter Notebook13 12 44
covidclinical/Phase2.1DockerAnalysis
Language:Dockerfile7 8 144
covidclinical/PhaseX.2SqlDataExtraction
SQL and documentation to extract 4CE Phase 1.2 and 2.2 data files.
Language:PLpgSQL6 7 06
covidclinical/Phase2.1DataRPackage
Language:R5 9 18
covidclinical/Phase1.1SqlDataExtraction
3 7 22
covidclinical/Phase2.1NeuroRPackage
R Package to run statistical analyses for COVID-19 patients with neurological conditions.
Language:R3 7 05
covidclinical/Phase2.1SqlDataExtraction
SQL code to generate Phase 2.1 CSV files
Language:TSQL3 7 04
covidclinical/website
Repository for covidclinical.net website.
Language:HTML3 6 24
covidclinical/Phase1.2PASCAnalysisRScript
Language:R2 5 02
covidclinical/Phase2.1AKIRPackage
R Package to run statistical analyses for COVID-19 patients with acute kidney injury.
Language:R2 6 14
covidclinical/Phase2.1ardsRPackage
Language:R2 6 02
covidclinical/Phase2.1MissingRPackage
Language:R2 5 01
covidclinical/Phase2.1NeuroAnalysis
Analysis of "Neurological diagnoses in hospitalized COVID-19 patients associated with adverse outcomes: a multinational cohort study"
Language:R2 5 01
covidclinical/Phase2.1NeuroRSummaries
Analysis of "Neurological diagnoses in hospitalized COVID-19 patients associated with adverse outcomes: a multinational cohort study"
Language:HTML2 7 01
covidclinical/Phase2.1SeverityAugRPackage
Language:R2 6 02
covidclinical/Phase2.2.psy_peds_trends
Language:R2 6 02
covidclinical/Phase2.2MISCRPackage
Language:R2 6 01
covidclinical/PhaseX.2QualityControlRpackage
Generate QC reports for 4CE phase 1.2 and phase 2.2 data
Language:R2 5 01
covidclinical/ARDS_aggregated_data_Public
1 5 01
covidclinical/Phase1.2QualityControlRpackage
Language:R1 5 01
covidclinical/Phase2.1AdmittedForCovidRPackage
Language:R1 7 01
covidclinical/Phase2.1SurvivalRPackage
Language:R1 7 01
covidclinical/Phase2.2.bacterial_infections
Analysis of the bacterial infections trends in the children population
Language:R1 7 01
covidclinical/Phase2.2.kawasaki_ad
Language:R11
covidclinical/Phase2.2.MISC
Language:R1 6 01
covidclinical/Phase2.2.peds_temporalTrends
Temporal trends of distinct phenotypes before and during pandemic in children
Language:R1 6 01
covidclinical/Phase2.2CovidEmbeddingRPackage
Language:C++1 5 01
covidclinical/Phase2.2NeuroPasc
1 5 01
covidclinical/Phase2.2PASCcondIRPackage
This package implements conditional independence testing procedures to identify codified concepts related to prior exposure to SARS-CoV-2 in 4CE Phase2.2 Data.
Language:R1 6 02
covidclinical/Version3SqlDataExtraction
SQL and documentation to extract 4CE Version 3 local patient-level and shared aggregate files.
Language:TSQL1 5 11