crchen12

crchen12's Stars

• nf-core/methylseq

  Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel

  Language:Nextflow137137

• joan-smith/comprehensive-tcga-survival

  Comprehensive survival analyses on the TCGA data.

  Language:Python115

• CamDavidsonPilon/lifelines-replications

  Using lifelines to replicate published articles

  Language:Jupyter Notebook62

• kassambara/survminer

  Survival Analysis and Visualization

  Language:R493160

• liulab-dfci/TRUST4_manuscript_evaluation

  TRUST4 manuscript evaluation

  Language:Python141

• CamDavidsonPilon/lifelines

  Survival analysis in Python

  Language:Python2.3k554

• kpatel427/YouTubeTutorials

  Language:R248116

• mdozmorov/TCGAsurvival

  Scripts to analyze TCGA data

  Language:R11441

• maxschelski/pytorch-cluster-metrics

  Pytorch implementation of standard metrics for clustering

  Language:Python9

• ZigaSajovic/Consensus_Clustering

  An implementation of Consensus clustering in Python

  Language:Python5716

• TankredO/pyckmeans

  Consensus and WECR K-Means clustering.

  Language:Python153

• Akramz/jupyter_plz

  Copilot for Jupyter notebooks.

  Language:Python293

• webermarcolivier/statannot

  add statistical annotations (pvalue significance) on an existing boxplot generated by seaborn boxplot

  Language:Jupyter Notebook39274

• BioinformaticsFMRP/TCGAbiolinks

  TCGAbiolinks

  Language:R289110

• joaofig/ved-explore

  Exploration of the Vehicle Energy Dataset

  Language:Jupyter Notebook5815

• tslearn-team/tslearn

  The machine learning toolkit for time series analysis in Python

  Language:Python2.9k336

• annoviko/pyclustering

  pyclustering is a Python, C++ data mining library.

  Language:Python1.2k249

• joaofig/discrete-frechet

  Implementation of the discrete Fréchet distance

  Language:Jupyter Notebook5512

• TheDatumOrg/kshape-python

  Python implementation of k-Shape

  Language:Python329105

• fpsanz/tscR

  Language:R2

• nloyfer/meth_atlas

  Language:Python4420

• christacaggiano/celfie

  cfDNA cell type of origin estimation

  Language:Jupyter Notebook2914

• akds/Pseudocell-Tracer

  Inferring cellular trajectories from scRNA-seq using Pseudocell Tracer

  Language:Jupyter Notebook5

• andreaskapou/BPRMeth

  Modelling DNA methylation profiles

  Language:R212

• cjekel/similarity_measures

  Quantify the difference between two arbitrary curves in space

  Language:Jupyter Notebook24541

• derohde/Fred

  A fast, scalable and light-weight C++ Fréchet and DTW distance library, exposed to python and focused on clustering of polygonal curves.

  Language:C++448

• qinhanmin2014/machine-learning-Andrew-Ng

  Machine learning online course from Andrew Ng.

  Language:HTML7460

• statsmodels/statsmodels

  Statsmodels: statistical modeling and econometrics in Python

  Language:Python10k2.9k

• reiinakano/scikit-plot

  An intuitive library to add plotting functionality to scikit-learn objects.

  Language:Python2.4k284

• pjhop/EWAS_MinE

  Language:R33