crsl4
statistician, julia-programmer, new PI, reproducibility-obsessed, yogi,...
University of Wisconsin-MadisonUniversity of Wisconsin-Madison
Pinned Repositories
ccdprobs
Clade probabilities
fast-stats
WI Fast Stats: accompanying data analysis for WI Fast Plants (UW-Madison)
forensic-stat
Learning materials for Intro to Statistics in Forensic Science
InconsistencySpeciesTreeGeneFlow
Scripts for simulation study on Syst Bio paper: Solis-Lemus, C., Yang, M. and Ane, C. Inconsistency of species-tree methods under gene flow
julia-workshop
Julia workshop for Data Science
methods-bio-data-workshop
Methods for Biological Data Workshop (UW-Madison)
mindful-programming
Computing resources for peace of mind
mixed-effects-notes
Mixed-effects notes from Doug Bates
nn-flow-cytometry
Reproducible scripts for manuscript: Prediction of functional markers of mass cytometry data via deep learning (2019). Solis-Lemus, C., X. Ma, M. Hostetter II, S. Kundu, P. Qiu, D. Pimentel-Alarcon
phylogenetics-class
A course in the theory and practice of phylogenetic inference from DNA sequence data
crsl4's Repositories
crsl4/julia-workshop
Julia workshop for Data Science
crsl4/phylogenetics-class
A course in the theory and practice of phylogenetic inference from DNA sequence data
crsl4/mindful-programming
Computing resources for peace of mind
crsl4/InconsistencySpeciesTreeGeneFlow
Scripts for simulation study on Syst Bio paper: Solis-Lemus, C., Yang, M. and Ane, C. Inconsistency of species-tree methods under gene flow
crsl4/forensic-stat
Learning materials for Intro to Statistics in Forensic Science
crsl4/methods-bio-data-workshop
Methods for Biological Data Workshop (UW-Madison)
crsl4/mixed-effects-notes
Mixed-effects notes from Doug Bates
crsl4/fast-stats
WI Fast Stats: accompanying data analysis for WI Fast Plants (UW-Madison)
crsl4/nn-phylogenetics
Novel Symmetry-preserving Neural Network Model for Phylogenetic Inference
crsl4/phylo-class-social
Dummy repository to practice git/github
crsl4/crsl4.github.io
Claudia Solís-Lemus
crsl4/ggnetworx
phylogenetic networks using ggplot2 and ggtree
crsl4/iBPP
Bayesian species delimitation integrating genes and traits
crsl4/julia-bootcamp
crsl4/just-the-docs
A modern, high customizable, responsive Jekyll theme for documentation with built-in search.
crsl4/learning-data-science
Learning materials for Data Science within biological applications such as WI Fast Plants: https://fastplants.org/
crsl4/llasso
Penalized regression for application to 22q dataset
crsl4/ordinal-gamut
Leveraging family history in GWAS
crsl4/phylo-escovopsis
Collaboration with Quimi Vidaurre Montoya
crsl4/phylo-poll
Students poll from my phylogenetics class
crsl4/pnas-network-review
crsl4/pp-jedi-committee
Documents for the Plant Path JEDI committee
crsl4/revbayes
crsl4/staph-visa
Reproducible scripts for the Su et al (2020) paper.
crsl4/sweater
👚 Speedy Word Embedding Association Test & Extras using R
crsl4/Taming-the-BEAST-2019-Eh-Lectures
Repository for lectures held at the 2019 TTB workshop in Squamish, British Columbia.
crsl4/tanggle
phylogenetic networks using ggplot2 and ggtree
crsl4/TICR
crsl4/toy-bayesian-nn
Toy implementation of a Bayesian NN model in Julia
crsl4/toy-lmm
Toy example of LMM to accompany the Julia workshop for Data Science