crsl4

statistician, julia-programmer, new PI, reproducibility-obsessed, yogi,...

University of Wisconsin-MadisonUniversity of Wisconsin-Madison

Pinned Repositories

ccdprobs
Clade probabilities
Language:Terra2 4 03
fast-stats
WI Fast Stats: accompanying data analysis for WI Fast Plants (UW-Madison)
Language:HTML1 3 31
forensic-stat
Learning materials for Intro to Statistics in Forensic Science
Language:HTML2 2 01
InconsistencySpeciesTreeGeneFlow
Scripts for simulation study on Syst Bio paper: Solis-Lemus, C., Yang, M. and Ane, C. Inconsistency of species-tree methods under gene flow
Language:Perl4 5 10
julia-workshop
Julia workshop for Data Science
Language:C68 9 222
methods-bio-data-workshop
Methods for Biological Data Workshop (UW-Madison)
2 2 02
mindful-programming
Computing resources for peace of mind
11 3 05
mixed-effects-notes
Mixed-effects notes from Doug Bates
2 4 00
nn-flow-cytometry
Reproducible scripts for manuscript: Prediction of functional markers of mass cytometry data via deep learning (2019). Solis-Lemus, C., X. Ma, M. Hostetter II, S. Kundu, P. Qiu, D. Pimentel-Alarcon
Language:Julia30
phylogenetics-class
A course in the theory and practice of phylogenetic inference from DNA sequence data
Language:HTML25 5 074

crsl4's Repositories

crsl4/julia-workshop
Julia workshop for Data Science
Language:C68 9 222
crsl4/phylogenetics-class
A course in the theory and practice of phylogenetic inference from DNA sequence data
Language:HTML25 5 074
crsl4/mindful-programming
Computing resources for peace of mind
11 3 05
crsl4/InconsistencySpeciesTreeGeneFlow
Scripts for simulation study on Syst Bio paper: Solis-Lemus, C., Yang, M. and Ane, C. Inconsistency of species-tree methods under gene flow
Language:Perl4 5 10
crsl4/forensic-stat
Learning materials for Intro to Statistics in Forensic Science
Language:HTML2 2 01
crsl4/methods-bio-data-workshop
Methods for Biological Data Workshop (UW-Madison)
2 2 02
crsl4/mixed-effects-notes
Mixed-effects notes from Doug Bates
2 4 00
crsl4/fast-stats
WI Fast Stats: accompanying data analysis for WI Fast Plants (UW-Madison)
Language:HTML1 3 31
crsl4/nn-phylogenetics
Novel Symmetry-preserving Neural Network Model for Phylogenetic Inference
Language:Python1 5 0
crsl4/phylo-class-social
Dummy repository to practice git/github
0 3 065
crsl4/crsl4.github.io
Claudia Solís-Lemus
Language:HTML2
crsl4/ggnetworx
phylogenetic networks using ggplot2 and ggtree
Language:R2 0
crsl4/iBPP
Bayesian species delimitation integrating genes and traits
Language:C2 0
crsl4/julia-bootcamp
1
crsl4/just-the-docs
A modern, high customizable, responsive Jekyll theme for documentation with built-in search.
Language:SCSS1 0
crsl4/learning-data-science
Learning materials for Data Science within biological applications such as WI Fast Plants: https://fastplants.org/
Language:R1 0
crsl4/llasso
Penalized regression for application to 22q dataset
Language:HTML2 0
crsl4/ordinal-gamut
Leveraging family history in GWAS
Language:R3 0
crsl4/phylo-escovopsis
Collaboration with Quimi Vidaurre Montoya
4 0
crsl4/phylo-poll
Students poll from my phylogenetics class
Language:Julia3 0
crsl4/pnas-network-review
crsl4/pp-jedi-committee
Documents for the Plant Path JEDI committee
Language:HTML
crsl4/revbayes
Language:C++2 0
crsl4/staph-visa
Reproducible scripts for the Su et al (2020) paper.
crsl4/sweater
👚 Speedy Word Embedding Association Test & Extras using R
crsl4/Taming-the-BEAST-2019-Eh-Lectures
Repository for lectures held at the 2019 TTB workshop in Squamish, British Columbia.
2 0
crsl4/tanggle
phylogenetic networks using ggplot2 and ggtree
Language:TeX
crsl4/TICR
Language:Perl4 0
crsl4/toy-bayesian-nn
Toy implementation of a Bayesian NN model in Julia
Language:Jupyter Notebook
crsl4/toy-lmm
Toy example of LMM to accompany the Julia workshop for Data Science
Language:HTML3 0