Pinned Repositories
breast-cancer
Using anthropometric data to predict whether or not a given patient has breast cancer.
cancer-clust
Classifying RNA-Seq gene expression data by tumor type using unsupervised machine learning techniques.
malaria-dreamchallenge
Malaria DREAM challenge
MDF
Magnetic Particle Imaging Data Format
nano-learn
Using machine learning to predict magnetic performance and heating efficiency of nanoparticles for imaging and cancer treatment.
nano-simulate
Stochastic simulation program to model nanoparticle dynamics.
rosalind
Rosalind bioinformatics exercises
scRNA-r-python-conversion
Conversion of SingleCellExperiment objects in R Bioconductor to AnnData objects in Scanpy for scRNA-seq analysis.
superscan
Superscan: Supervised Single-Cell Annotation
veatch_2022
cshasha's Repositories
cshasha/veatch_2022
cshasha/scRNA-r-python-conversion
Conversion of SingleCellExperiment objects in R Bioconductor to AnnData objects in Scanpy for scRNA-seq analysis.
cshasha/cancer-clust
Classifying RNA-Seq gene expression data by tumor type using unsupervised machine learning techniques.
cshasha/superscan
Superscan: Supervised Single-Cell Annotation
cshasha/nano-learn
Using machine learning to predict magnetic performance and heating efficiency of nanoparticles for imaging and cancer treatment.
cshasha/nano-simulate
Stochastic simulation program to model nanoparticle dynamics.
cshasha/rosalind
Rosalind bioinformatics exercises
cshasha/breast-cancer
Using anthropometric data to predict whether or not a given patient has breast cancer.
cshasha/malaria-dreamchallenge
Malaria DREAM challenge
cshasha/MDF
Magnetic Particle Imaging Data Format
cshasha/mps-process
Script to import and process data from home-built magnetic particle spectrometer.
cshasha/simulation-analysis
Scripts to analyze stochastic simulation data.
cshasha/systems-biology-of-disease
Course material and projects done for the Systems Biology of Disease course at the Institute for Systems Biology.