ctSkennerton/minced

CRISPRDetect: A flexible algorithm to define CRISPR arrays

tseemann opened this issue · 1 comments

Just FYI

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869251/

CRISPRDetect: A flexible algorithm to define CRISPR arrays

CRISPR (clustered regularly interspaced short palindromic repeats) RNAs provide the specificity for noncoding RNA-guided adaptive immune defence systems in prokaryotes. CRISPR arrays consist of repeat sequences separated by specific spacer sequences. CRISPR arrays have previously been identified in a large proportion of prokaryotic genomes. However, currently available detection algorithms do not utilise recently discovered features regarding CRISPR loci.

I reviewed the paper

On May 21, 2016, at 7:14 PM, Torsten Seemann notifications@github.com wrote:

Just FYI

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869251/

CRISPRDetect: A flexible algorithm to define CRISPR arrays

CRISPR (clustered regularly interspaced short palindromic repeats) RNAs provide the specificity for noncoding RNA-guided adaptive immune defence systems in prokaryotes. CRISPR arrays consist of repeat sequences separated by specific spacer sequences. CRISPR arrays have previously been identified in a large proportion of prokaryotic genomes. However, currently available detection algorithms do not utilise recently discovered features regarding CRISPR loci.


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