Cytoscape Consortium

Pinned Repositories

cyREST
Core App: REST API module for Cytoscape
Language:JavaScript30 21 10813
cytoscape
Cytoscape: an open source platform for network analysis and visualization
Language:Shell585 84 0139
cytoscape-api
Cytoscape 3 API bundles.
Language:Java22 24 034
cytoscape-impl
Cytoscape 3 implementation bundles.
Language:Java36 24 042
cytoscape-tutorials
Collection of modular Cytoscape tutorials for online presentation using reveal.js
Language:HTML315 48 57118
cytoscape.js
Graph theory (network) library for visualisation and analysis
Language:JavaScript10.2k 224 2.8k1.6k
cytoscape.js-dagre
The Dagre layout for DAGs and trees for Cytoscape.js
Language:JavaScript252 20 5782
ipycytoscape
A Cytoscape Jupyter widget
Language:Python270 29 16163
py2cytoscape
Python utilities for Cytoscape and Cytoscape.js
Language:Python178 18 7745
py4cytoscape
Python library for calling Cytoscape Automation via CyREST
Language:Python73 32 10515

Cytoscape Consortium's Repositories

cytoscape/py2cytoscape
Python utilities for Cytoscape and Cytoscape.js
Language:Python178 18 7745
cytoscape/cytoscape.js-cose-bilkent
The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.
Language:HTML126 25 7345
cytoscape/wineandcheesemap
Language:JavaScript81 13 652
cytoscape/cytoscape-jupyter-widget
Cytoscape.js based network visualizer for Jupyter Notebook
Language:JavaScript38 12 1114
cytoscape/cy-jupyterlab
Jupyter lab widget for rendering graphs (networks)
Language:Jupyter Notebook24 6 74
cytoscape/cytoscape.js-spread
The speedy Spread physics simulation layout for Cytoscape.js
Language:JavaScript24 18 920
cytoscape/jupyter-bridge
Bridge enables Jupyter code on remote server to execute HTTP calls on local PC
Language:Python4 30 03
cytoscape/biopax
Core App: BioPAX support
Language:Java3 11 13
cytoscape/copycat-layout
Map the locations of nodes (and the network view) from one network to another. Easily compare networks side by side by positioning the views similarly.
Language:Jupyter Notebook3 12 12
cytoscape/cx2js
A CX to Cytoscape JS library
Language:JavaScript3 19 261
cytoscape/cx-viz-converter
Language:JavaScript2 15 01
cytoscape/cxio
CX serialization and de-serialization
Language:Java2 2 21
cytoscape/cyChart
interactive histogram and scatter charts to select nodes or create filters
Language:Java2 12 332
cytoscape/file-transfer-app
Language:Java2 4 01
cytoscape/idmapper
Identifier mapping
Language:Java2 20 371
cytoscape/mcode-service
2 15 0
cytoscape/enhancedGraphics
App to add enhanced node graphics to Cytoscape 3
Language:Java1 1 0
cytoscape/javascript-notebooks
A Jekyll site for publishing JS notebooks for Cytoscape automation via js4cytoscape
Language:JavaScript1
cytoscape/LargestSubnetwork
Select Largest Subnetwork App
Language:Java12
cytoscape/network-merge
Core App: Network Merge
Language:Java1 19 03
cytoscape/json
Core App: JSON support
Language:Java0 18 02
cytoscape/network-analyzer
Core App: Network Analyzer
Language:Java0 11 12
cytoscape/webservice-biomart-client
Core App: BioMart Client
Language:Java0 9 01
cytoscape/app-manager-rework
Language:HTML15 0
cytoscape/cyannotation-cx2js
Renders Cytoscape Desktop annotations from CX files via cytoscape.js-canvas
Language:JavaScript11 41
cytoscape/datasource-biogrid
Core App: BioGrid Data Source
Language:Java1
cytoscape/opencl-cycl
Language:Java10 02
cytoscape/opencl-layout
Core App: OpenCL Layout
Language:Java1
cytoscape/psi-mi
Core App: PSI-MI support
Language:Java10 01
cytoscape/webservice-psicquic-client
Core App: PSICQUIC Client
Language:Java19 23