cyycyj

Pinned Repositories

quarTeT
A telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat identification
Language:Python95 4 397
teloclip
A tool for the recovery of unassembled telomeres from soft-clipped read alignments.
Language:Python35 5 234
LJA
Language:C++109 11 3816
hifiasm
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Language:C++534 27 65687
Chen
a
00
RepeatMasker
RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.
Language:Perl228 6 25750
RepeatModeler
De-Novo Repeat Discovery Tool
Language:Perl190 8 24422
iTAK
iTAK
Language:Python38 3 89
LTR_retriever
LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also included in this package.
Language:Perl189 7 17140
AlleleFinder
AlleleFinder is a tool for identifying allele genes from polyploid genome.
Language:Python22 3 67