Pinned Repositories
bauhaus
minimal tertiary analysis for PacBio
bauhaus2
For testing only
BlockPuzzle
DumbView
A PacBio genome browser for command line nerds
fqgrep
An approximate sequence pattern matcher for FASTQ/FASTA files.
GenomicConsensus
PacBio® variant and consensus caller
jax
Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more
pbcore
A Python library for reading and writing PacBio® data files
pbdoctorb
PacBio data inspection/munging tools (unsupported)
PRmm
PulseRecognizer minus minus
dalexander's Repositories
dalexander/bauhaus
minimal tertiary analysis for PacBio
dalexander/DumbView
A PacBio genome browser for command line nerds
dalexander/fqgrep
An approximate sequence pattern matcher for FASTQ/FASTA files.
dalexander/pbdoctorb
PacBio data inspection/munging tools (unsupported)
dalexander/PRmm
PulseRecognizer minus minus
dalexander/GenomicConsensus
PacBio® variant and consensus caller
dalexander/jax
Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more
dalexander/pbcore
A Python library for reading and writing PacBio® data files
dalexander/bauhaus2
For testing only
dalexander/BlockPuzzle
dalexander/BoggleSolver
dalexander/emacs
emacs
dalexander/gfftools
Perl scripts for working with the GFF format
dalexander/gists
dalexander/htslib
C library for high-throughput sequencing data formats
dalexander/htslib_tell_issue
dalexander/meep
free finite-difference time-domain (FDTD) software for electromagnetic simulations
dalexander/PRmm-notebooks
IPython notebooks using the PRmm APIs
dalexander/pysam_issue
dalexander/QuiverModeling
Predictive model of Quiver accuracy
dalexander/style-guard-demo
code style/formatting enforcement using clang-format
dalexander/SWIG-BamTools
SWIG bindings for BamTools