Donald Danforth Plant Science Center
Our Mission: Improve the Human Condition Through Plant Science
St. Louis, MO
Pinned Repositories
apps-phenotyping
The following are scripts and instruction necessary to set up 4 Raspberry Pi Powered Imaging Platforms
data-science-tools
Data Science Tools
outreach
Repository for Outreach Activities at DDPSC
pcvr
R functions for use with plantCV output
plantcv
Plant phenotyping with image analysis
plantcv-annotate
add-on package for PlantCV annotation tools
plantcv-binder
A repository for interactive PlantCV documentation using Binder
plantcv-geospatial
Geospatial add-on package to PlantCV
plantcv-v2-paper
PlantCV image analysis scripts used in the PlantCV v2.0 paper
plantcv-workshop
PlantCV Workshops
Donald Danforth Plant Science Center's Repositories
danforthcenter/plantcv
Plant phenotyping with image analysis
danforthcenter/plantcv-tutorial-v4-VIS-single-plant
PlantCV Tutorial using release-4.0 for single plant, VIS image (RGB) analysis
danforthcenter/pcvr
R functions for use with plantCV output
danforthcenter/plantcv-tutorial-morphology
danforthcenter/plantcv-geospatial
Geospatial add-on package to PlantCV
danforthcenter/plantcv-tutorial-seeds
seed workflow tutorial
danforthcenter/plantcv-tutorial-threshold
Tutorial for understanding Thresholding using PlantCV.
danforthcenter/plantcv-tutorial-watershed
watershed tutorial
danforthcenter/ktgreenham-brassica-drought-paper
danforthcenter/plantcv-annotate
add-on package for PlantCV annotation tools
danforthcenter/plantcv-homology-tutorials
danforthcenter/plantcv-tutorial-arabidopsis-tray
Tutorial for analyzing top-down trays of plants with PlantCV
danforthcenter/plantcv-tutorial-camera-calibration
danforthcenter/plantcv-tutorial-color-correction
danforthcenter/plantcv-tutorial-grayscale
Tutorial for analyzing grayscale image data using PlantCV.
danforthcenter/plantcv-tutorial-hyperspectral
danforthcenter/plantcv-tutorial-hyperspectral-smf-detection
danforthcenter/plantcv-tutorial-kmeans-clustering
danforthcenter/plantcv-tutorial-machine-learning
Tutorial for analyzing image data using machine learning tools from PlantCV.
danforthcenter/plantcv-tutorial-photosynthesis
danforthcenter/plantcv-tutorial-roi
Tutorial for understanding Regions of Interest using PlantCV.
danforthcenter/plantcv-tutorial-simple-rgb-workflow
danforthcenter/plantcv-tutorial-thermal
danforthcenter/plantcv-tutorial-vis-nir
plantcv-tutorial-vis-nir
danforthcenter/aws-tools
Danforth Center tools for working with AWS
danforthcenter/plantcv-3-paper
danforthcenter/plantcv-tutorial-input-output
danforthcenter/plantcv-tutorial-photosynthesis-multi
Tutorial for using PlantCV for analysis of photosynthesis images that contain multiple objects (such as multiple plants or leaves).
danforthcenter/plantcv-tutorial-v4-multiobject
Tutorial for analyzing multiple plants, leaves, or objects using PlantCV v4.
danforthcenter/tobacco-heat-paper
Documents and scripts related to publication on High Lipid Producing tobacco (Nicotiana tabacum).