danielchang2002

5038W_Final

deepdep_reanalysis

Chang et al., Ridge regression baseline model outperforms deep learning method for cancer genetic dependency prediction

DogBreedClassification

FecalMetabolomics

GMWI-webtool

Chang et al., GMWI-webtool: a user-friendly browser application for assessing health through metagenomic gut microbiome profiling, Bioinformatics (2023).

GMWI2

Chang and Gupta et al., Gut Microbiome Wellness Index 2 Enhances Health Status Prediction from Gut Microbiome Taxonomic Profiles, Nature Communications (2024).

MinesweeperBot

Simple minesweeper bot created with python and pyautogui

Pygame

Simple games created with Pygame

TaxiBGC_2022

Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Secondary Metabolite Production Potential in Metagenomes, mSystems (2022).

tetris_ai

Tetris environment with AI algorithms for CSCI 4511W at the University of Minnesota

danielchang2002/TaxiBGC_2022

Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Secondary Metabolite Production Potential in Metagenomes, mSystems (2022).

danielchang2002/GMWI2

Chang and Gupta et al., Gut Microbiome Wellness Index 2 Enhances Health Status Prediction from Gut Microbiome Taxonomic Profiles, Nature Communications (2024).

danielchang2002/GMWI-webtool

Chang et al., GMWI-webtool: a user-friendly browser application for assessing health through metagenomic gut microbiome profiling, Bioinformatics (2023).

danielchang2002/5038W_Final

danielchang2002/deepdep_reanalysis

Chang et al., Ridge regression baseline model outperforms deep learning method for cancer genetic dependency prediction

danielchang2002/evo_inverton_jacobian

danielchang2002/GMHI-pipeline

danielchang2002/5038W

danielchang2002/5481_final

danielchang2002/5481_supplementary

danielchang2002/5611_hw

danielchang2002/5611_IK

danielchang2002/5611_PDE

danielchang2002/5611_projects

danielchang2002/bioconda-recipes

Conda recipes for the bioconda channel.

danielchang2002/cool_repository

danielchang2002/danielchang2002

danielchang2002/danielchang2002.github.io

danielchang2002/FR-Perturb_DepMap

Factorize-Recover for Perturb-seq analysis (FR-Perturb)

danielchang2002/GI_transfer_learning

danielchang2002/GMHI2-analysis

danielchang2002/inverton_notebooks

danielchang2002/MAGIC

danielchang2002/MAGIC_GBS_cohort

danielchang2002/MGS-canopy

danielchang2002/ML4H_final

danielchang2002/prebiotics

danielchang2002/scGPT

danielchang2002/TCRP_GIN

Few shot learning for cancer

danielchang2002/VAECox_GIN

ISMB 2020: Improved survival analysis by learning shared genomic information from pan-cancer data