A personal project exploring the world of network theory and complex systems in Biology through protein-protein interaction networks. Using the Quarto publishing system in R studio, a few network metrics were calculated and plotted to demonstrate different properties of the network. The respective report is available in HTML format, part of which was customized using a CSS file.
- Introduction
- Results
- Graph Visualization
- Node Degree
- Degree Distribution
- Community Detection [with Louvain clustering algorithm]
- Modularity
- Betweenness Centrality
- Transitivity
- The Importance of Hubs
- Conclusion
- References
This project was developed using the following software and R libraries:
- R version 4.3.3
ggraph
tidygraph
ggplot2
igraph
gt