davidhoksza
Bioinformatician with a software engineering background focused mainly on the development of structural bioinformatics tools.
Charles UniversityPrague
Pinned Repositories
MolArt
MOLeculAR structure annoTator
p2rank-framework
The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc.
traveler
Template-based RNA secondary structure visualization
apo-holo-md-analysis
bayescreen
Easy-to-use ligand-based virtual screening tool using molecular fragments features and Naive Bayes learning
BioAlphabet
Web-based convertor of texts to bio-domain alphabets
bioinformatics-algo-labs
ngl-binder
optimap
Optical mapping
parallel-coordinates-generator
D3.js-based parallel coordinates visualization
davidhoksza's Repositories
davidhoksza/bayescreen
Easy-to-use ligand-based virtual screening tool using molecular fragments features and Naive Bayes learning
davidhoksza/apo-holo-md-analysis
davidhoksza/optimap
Optical mapping
davidhoksza/BioAlphabet
Web-based convertor of texts to bio-domain alphabets
davidhoksza/bioinformatics-algo-labs
davidhoksza/ngl-binder
davidhoksza/parallel-coordinates-generator
D3.js-based parallel coordinates visualization
davidhoksza/awesome-learning-resources
🔥 Awesome list of resources on Web Development.
davidhoksza/biochem-tools
davidhoksza/bioinformatics-program-website
davidhoksza/bp2graph
Tool for converting secondary structure of RNA into the dot format
davidhoksza/cors-anywhere
CORS Anywhere is a NodeJS reverse proxy which adds CORS headers to the proxied request.
davidhoksza/cu-bioinformatics-seminar
Website of the bioinformatics seminar at the Charles University
davidhoksza/cu-bioinformatics-website
Website of bioinformatics at Charles University
davidhoksza/davidhoksza.github.io
davidhoksza/drug-reactions-data
davidhoksza/es-ndd
Essential Sites in NDD proteins
davidhoksza/ged4py
Implementation of a graph edit distance in python
davidhoksza/LiteMol
A library/plugin for handling 3D structural molecular data (not only) in the browser.
davidhoksza/minerva-plugins-starter-kit
davidhoksza/nightingale
Data visualisation web components for the life sciences.
davidhoksza/p2rank
P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure.
davidhoksza/ProtVista
A BioJS viewer for protein sequence features
davidhoksza/protvista-uniprot
The ProtVista tool for the UniProt website
davidhoksza/pss
Protein Structure Superposition
davidhoksza/sbl-converter
Systems Biology Layout Converter
davidhoksza/ViFrame
ViFrame application for blind review purpose
davidhoksza/vis-data