davidhoksza

davidhoksza's Stars

• skrhakv/CryptoBench

  Scripts for the creation of CryptoBench, a new dataset of cryptic binding sites

  Language:Jupyter Notebook4

• hugohrban/ProGen2-finetuning

  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.

  Language:Python3610

• bartongroup/LBS-comparison

  This is a GitHub Repository containing the data and code used for a thorough comparison of 11 ligand binding site prediction tools

  Language:Jupyter Notebook112

• r2dt-bio/R2DT

  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts

  Language:Python6512

• microsoft/protein-frame-flow

  Fast protein backbone generation with SE(3) flow matching.

  Language:Python23722

• sacdallago/bio_embeddings

  Get protein embeddings from protein sequences

  Language:HTML47367

• cusbg/AHoJ-project

  :wave: Webserver & command-line tool for search of APO (unbound) protein structures from HOLO (bound) forms and vice versa. http://apoholo.cz

  81

• plouc/nivo

  nivo provides a rich set of dataviz components, built on top of the awesome d3 and React libraries

  Language:TypeScript13.3k1k

• ebi-webcomponents/nightingale

  Data visualisation web components for the life sciences.

  Language:TypeScript12438

• fjossinet/RNArtist

  With RNArtist, you construct a collection of RNA structures that can be gathered into RNA families, projects,...

  Language:Kotlin15810

• cusbg/prankweb

  Web application for protein-ligand binding sites analysis and visualization

  Language:TypeScript94

• cusbg/traveler

  Template-based RNA secondary structure visualization

  Language:PostScript259

• lauragift21/awesome-learning-resources

  🔥 Awesome list of resources on Web Development.

  5.5k829

• molstar/molstar

  A comprehensive macromolecular library

  Language:TypeScript686158

• cnr-isti-vclab/meshlab

  The open source mesh processing system

  Language:C++4.9k833

• jacquesfize/ged4py

  Implementation of a graph edit distance in python

  Language:Python3410

• networkx/networkx

  Network Analysis in Python

  Language:Python15.2k3.3k

• http-party/node-http-proxy

  A full-featured http proxy for node.js

  Language:JavaScript14k2k

• Genymobile/scrcpy

  Display and control your Android device

  Language:C116k11k

• EuropePMC/Biojs.Annotator

  Javascript based component for highlighting text-mined annotations of different semantic types in a full text article identified by a PMCID

  Language:JavaScript112

• davidlyons/threejs-intro

  Intro to WebGL with Three.js presentation

  Language:JavaScript31677

• jendelel/PrankWebApp

  Web application for protein-ligand binding sites analysis and visualization

  Language:JavaScript147

• jendelel/p2rank

  Ligand-binding site prediction tool based on machine learning.

  Language:Groovy3

• dsehnal/LiteMol

  A library/plugin for handling 3D structural molecular data (not only) in the browser.

  Language:JavaScript15738