davidliwei
bioinformatician, computational biologist, computer scientist, assistant professor at Children's National Medical Center and George Washington University
Children's National Medical CenterWashington, DC, USA
Pinned Repositories
awesome-CRISPR
List of software/websites/databases/other stuff for genome engineering
mageck
Experimental source code for MAGeCK (Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout)
mageck2
A next generation of CRISPR screening analysis tool
mageck2-demo
PS
Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights in single-cell perturbation datasets.
rnaseqmut
RNA-Seq Mutation Detection
RNASeqReadSimulator
RNASeqReadSimulator is a simple tool to generate simulated single-end or paired-end RNA-Seq reads.
scMAGeCK
The R Bioconductor package for scMAGeCK.
davidliwei's Repositories
davidliwei/awesome-CRISPR
List of software/websites/databases/other stuff for genome engineering
davidliwei/rnaseqmut
RNA-Seq Mutation Detection
davidliwei/RNASeqReadSimulator
RNASeqReadSimulator is a simple tool to generate simulated single-end or paired-end RNA-Seq reads.
davidliwei/mageck
Experimental source code for MAGeCK (Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout)
davidliwei/mageck2
A next generation of CRISPR screening analysis tool
davidliwei/awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
davidliwei/PS
Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights in single-cell perturbation datasets.
davidliwei/mageck2-doc
Documentations for mageck2
davidliwei/NGStools
Scripts and tools for Next Generation Sequencing
davidliwei/Homework_2020
Homeworks
davidliwei/Lab_2020
Repository for all labs for STAT115 for 2020
davidliwei/mageck2-demo
davidliwei/scGPT
davidliwei/SKYtree
Source codes for building glioma evolutionary trees from SKY data