davidmeijer/sgpy

Python package for creating and interacting with graph databases of protein domains and their genome coordinates

Note: All releases may intorduce breaking changes until the release of v1.0.0

Status

Github

PyPI

https://pypi.org/project/socialgene/

Contributing

Please see https://github.com/socialgene/sgpy/blob/main/CONTRIBUTING.md

Documentation

Both user and developer documentation can be found at: https://socialgene.github.io

Installation with pip

pip install socialgene

Create conda environment and install python package inside

git clone https://github.com/socialgene/sgpy.git
cd sgpy
make create_conda

Build Python package from source

git clone https://github.com/socialgene/sgpy.git
cd sgpy
make install_python

Run all tests

git clone https://github.com/socialgene/sgpy.git
cd sgpy
make run_ci

Classes:

Modules