tools and notes for long reads analysis
- https://labs.epi2me.io/ oxford Nanopore dataset and tutorials
- https://labs.epi2me.io/dataindex/
Accelerated identification of disease-causing variants with ultra-rapid nanopore genome sequencing
Pipeline is Dorado, minimap2, sniffles2, deepvariant, you can do it under 1 hour now https://x.com/erictdawson/status/1710118874300219881?s=20 https://developer.nvidia.com/blog/boosting-ultra-rapid-nanopore-sequencing-analysis-on-nvidia-dgx-a100/