Raw-QC Pipeline
A pipeline to control the quality and trim adapters of FastQ files.
Raw-QC is a standard quality control pipeline written in bash. Input reads (paired or single) adapters are removed with Atropos that able to detect adapters contents from a list of adapters.
Please see the documentation for install and usage process.
Contribution & Support
Contributions and suggestions for new features are welcome, as are bug reports ! Please create a new issue for any of these.
If in doubt, feel free to get in touch with the author directly: @ddesvill (dimitri.desvillechabrol@curie.fr)
Main author: @ddesvill