Pinned Repositories
bioconvert
bioservices
Access to Biological Web Services from Python.
catppuccin-tmux
💽 Soothing pastel theme for Tmux!
config
pyvif
Python Virus Integration Finder detects integration site of virus in human genome using capture pacbio.
react-native-mobeye-geolocation
React Native Geolocation API for Android and iOS. It allows to get geolocation as well in background as in foreground.
denovo
Denovo Assembly from FASTQ files
lora
Run assembler (Canu, flye, hifiasm) on a set of long read files
MergeGI
MergeGI provides a single command line to merge and select barcoded raw data from MGI sequencing runs into a set of FastQ files ready for subsequent bioinformatics analysis.
sequana
Sequana: a set of Snakemake NGS pipelines
ddesvillechabrol's Repositories
ddesvillechabrol/pyvif
Python Virus Integration Finder detects integration site of virus in human genome using capture pacbio.
ddesvillechabrol/bioconvert
ddesvillechabrol/config
ddesvillechabrol/bioservices
Access to Biological Web Services from Python.
ddesvillechabrol/catppuccin-tmux
💽 Soothing pastel theme for Tmux!
ddesvillechabrol/circlator
A tool to circularize genome assemblies
ddesvillechabrol/django-bitfield
A BitField extension for Django Models
ddesvillechabrol/damona
singularity environment manager (application to NGS and bioinformatics)
ddesvillechabrol/full-stack-fastapi-postgresql
Full stack, modern web application generator. Using FastAPI, PostgreSQL as database, Docker, automatic HTTPS and more.
ddesvillechabrol/kickstart.nvim
A launch point for your personal nvim configuration
ddesvillechabrol/lora
Run assembler (Canu, flye, hifiasm) on a set of long read files
ddesvillechabrol/MergeGI
ddesvillechabrol/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
ddesvillechabrol/raw-qc
Pipeline for quality controls and trimming of raw sequencing data
ddesvillechabrol/react-interview
ddesvillechabrol/react-native
A framework for building native apps with React.
ddesvillechabrol/react-native-image-crop-picker
iOS/Android image picker with support for camera, video, configurable compression, multiple images and cropping
ddesvillechabrol/react-native-mobeye-geolocation
ddesvillechabrol/react-native-netinfo
React Native Network Info API for Android & iOS
ddesvillechabrol/react-native-permissions
Check and request user permissions in ReactNative (iOS and Android)
ddesvillechabrol/react-native-splash-screen-demo
ddesvillechabrol/rustlings
:crab: Small exercises to get you used to reading and writing Rust code!
ddesvillechabrol/secure-code-game
ddesvillechabrol/sequana
Sequana: a set of Snakemake NGS pipelines
ddesvillechabrol/sequana-wrappers
The Sequana Wrapper Repository is a collection of reusable wrappers used in Sequana Pipelines.
ddesvillechabrol/sequana_pipeline_template
a cookiecutter sequana pipeline template
ddesvillechabrol/sequana_pipetools
A set of tools to help building or using sequana pipelines
ddesvillechabrol/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
ddesvillechabrol/Sniffles
Structural variation caller using third generation sequencing
ddesvillechabrol/variant_calling