Pinned Repositories
EmbryoTimecourse2018
Data and analysis scripts for our Embryo Timecourse paper.
datasciencecoursera
datasharing
The Leek group guide to data sharing
ssam_example
SSAM examples
starfish
starfish: unified pipelines for image-based transcriptomics
Utils
scenicplus
SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.
pycisTopic
pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.
degrainger's Repositories
degrainger/starfish
starfish: unified pipelines for image-based transcriptomics
degrainger/Utils
degrainger/EmbryoTimecourse2018
Data and analysis scripts for our Embryo Timecourse paper.
degrainger/ssam_example
SSAM examples
degrainger/datasciencecoursera
degrainger/datasharing
The Leek group guide to data sharing