FASTX provides I/O and utilities for manipulating FASTA and FASTQ, formatted sequence data files.
FASTX is made available to install through BioJulia's package registry.
Julia by default only watches the "General" package registry, so before you start, you should add the BioJulia package registry.
Start a julia terminal, hit the ] key to enter pkg mode (you should see the prompt change from julia> to pkg> ), then enter the following command:
registry add https://github.com/BioJulia/BioJuliaRegistry.gitAfter you've added the registry, you can install FASTX from the julia REPL.
Press ] to enter pkg mode again, and enter the following:
add FASTXIf you are interested in the cutting edge of the development, please check out the master branch to try new features before release.
FASTX is tested against Julia 1.X on Linux, OS X, and Windows.
Latest build status:
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Take a look at the contributing files detailed contributor and maintainer guidelines, and code of conduct.
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