Pinned Repositories
10X_fastq_filter
deconv_benchmark
dence.github.io
Daniel builds a website!
Fr1_filtering_scripts
GFF3_tools
Tools that address specific GFF3 manipulation problems that I encounter
overrepresented_trichomonad_gene_families
working with custom classification databases for taxonomer
PAV_segregants
piney_scripts
scripts written for pinus taeda L. projects
snakemake_pipelines
snakemake pipelines. It is what it is.
vcf2joinmap
dence's Repositories
dence/piney_scripts
scripts written for pinus taeda L. projects
dence/snakemake_pipelines
snakemake pipelines. It is what it is.
dence/vcf2joinmap
dence/10X_fastq_filter
dence/deconv_benchmark
dence/dence.github.io
Daniel builds a website!
dence/Fr1_filtering_scripts
dence/GFF3_tools
Tools that address specific GFF3 manipulation problems that I encounter
dence/overrepresented_trichomonad_gene_families
working with custom classification databases for taxonomer
dence/PAV_segregants
dence/pinesnp_shiny
shiny app to annotate SNPs from pine projects
dence/rna-seq-star-deseq2
RNA-seq workflow using STAR and DESeq2
dence/rnaseq_star_iseq_trial
dence/rnastar_deseq2_isoseq_trial
dence/rnastar_deseq2_MeJA_timecourse
dence/rnastar_dseq2_old_RNAseq
dence/snakemake_pipeline_kallisto_deseq2
dence/test_snakemake
dence/test_workflow
dence/trichy_scripts
scripts written for the trichomonas vaginalis reannotation paper
dence/Tvaginalis_TE_polymorphism
dence/vcf2LD
Using brentp's cy2vcf to calcululate LD's in a segregating population.
dence/vcf_filters
dence/wham
All-things-BAM
dence/dence-ds-cookiecutter
cookiecutter template repo with everything setup just how I like it.
dence/jobsearch-EDA