dfsp-spirit/fsbrain

Issues

• Error in rgl::open3d() : OpenGL is not available in this build

  #55 opened 4 months ago by xasapakos
  1

• save output as grob objects

  #51 opened a year ago by GerardYu
  1

• Saving annotation to file

  #53 opened a year ago by iamjoostjanssen
  2

• Add title to plots

  #54 opened a year ago by GerardYu
  1

• Error: rgl.viewpoint is depreciated

  #52 opened a year ago by cooperr11
  5

• New fsbrain installation on M1 Mac does not show colorbar

  #37 opened 3 years ago by utooley
  3

• Tight layout with 9 view inflated

  #50 opened 2 years ago by mattsodoma
  8

• 9 view inflated surface

  #49 opened 2 years ago by mattsodoma
  1

• No figure output

  #46 opened 2 years ago by rb643
  20

• MacOS support of fsbrain

  #47 opened 2 years ago by dfsp-spirit
  2

• No picture out after running "vis.subject.annot" code in Ubuntu 20.04

  #45 opened 2 years ago by Clancy-wu
  6

• Support plotting on log scale

  #44 opened 2 years ago by dfsp-spirit
  1

• visualising group difference maps

  #40 opened 2 years ago by MaLiUHH
  8

• Export directly

  #41 opened 2 years ago by mattsodoma
  5

• Backup nitestdata on public, scientific repo

  #42 opened 2 years ago by dfsp-spirit
  1

• Issues to create a GIF file using fsbrain docker image

  #33 opened 2 years ago by XinQi7788
  1

• Error in setwd(dir) : cannot change working directory - while creating GIF movie using fsbrain locally

  #34 opened 2 years ago by XinQi7788
  1

• display p-values overlay

  #38 opened 3 years ago by knutj
  1

• Render with R-shiny

  #39 opened 2 years ago by dipterix
  2

• Is it possible to visualize the Surface and Volume at the same time?

  #32 opened 3 years ago by wjddyd66
  2

• datastructure returned by label.to.annot does not have 'fs.annot' class

  #36 opened 3 years ago by dfsp-spirit
  1

• annot.outline as a background

  #28 opened 3 years ago by AndrewLawrence
  3

• Make it easy to get additional brain atlases

  #15 opened 3 years ago by dfsp-spirit
  3

• Inflated views intertwined

  #35 opened 3 years ago by signebray
  3

• coloredmesh from Brain surface trimesh and values vector

  #31 opened 3 years ago by rcruces
  7

• Create fsbrain API cheat sheet

  #22 opened 3 years ago by dfsp-spirit
  1

• Snapshot at an angle?

  #30 opened 3 years ago by utooley
  3

• I have a question about lh_region_value_list & rh_region_value_list

  #29 opened 3 years ago by wjddyd66
  5

• Problem with basic visualization in tutorial

  #27 opened 3 years ago by gpdm94
  4

• Getting error that the subject file is missing even though the subject file is present in the subjects directory.

  #26 opened 3 years ago by vaidehithakre21
  14

• Visualising volume data with surface boundaries

  #24 opened 3 years ago by sidchop
  3

• Add custom lobe annotation to be able to use vis.region.values.on.subject with lobes

  #13 opened 3 years ago by dfsp-spirit
  1

• Support writing subject metadata to separate MD file when saving cached data for groups

  #12 opened 3 years ago by dfsp-spirit
  2

• highlighting directly adjacent vertices fails with error

  #25 opened 3 years ago by dfsp-spirit
  1

• Fix white stripes in custom background of images exported with vis.export.from.coloredmeshes

  #21 opened 3 years ago by dfsp-spirit
  1

• makecmap_options 'range' return error and Additional view

  #20 opened 4 years ago by rcruces
  6

• Min/Max setting in plotting

  #19 opened 4 years ago by rb643
  17

• Neuroconductor CI

  #16 opened 4 years ago by dfsp-spirit
  2

• Problem with tutorial

  #18 opened 4 years ago by shima-jalalian
  3

• Match the background vertices and results vertices

  #17 opened 4 years ago by icupsy
  6

• Multi-layer transparency

  #14 opened 4 years ago by dfsp-spirit
  0

• fsaverage.path() should prefer FreeSurfer version over local download

  #11 opened 4 years ago by dfsp-spirit
  1

• High-level interface to export publication quality figure with colorbar

  #10 opened 4 years ago by dfsp-spirit
  1

• Colormap over BG + Saving

  #5 opened 4 years ago by dbrennan44
  2

• Support passing data for both hemispheres in a single vector to vis functions

  #9 opened 4 years ago by dfsp-spirit
  1

• Support limiting the plotted data range

  #8 opened 4 years ago by dfsp-spirit
  1

• Views other than t4 garbled for inflated and vis.x.on.subject

  #7 opened 4 years ago by utooley
  5

• Symmetrical colorbars are drawn incorrectly

  #6 opened 4 years ago by dfsp-spirit
  2

• Gray/Black inflated brain (like freesurfer)

  #3 opened 4 years ago by dbrennan44
  12

• Rendering of standard space morphometry data looks off

  #4 opened 5 years ago by dfsp-spirit
  1