Pinned Repositories
abc_atlas_access
Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas
abc_datalad
abide-pydra
Use pydra to run fmriprep on a SLURM cluster
afni
Official AFNI source and documentation
mit_diary
neuroML
A set of notebooks to introduce neuroscientists to concepts in machine learning.
pycontest
reproschema
A standardized form generation and data collection schema to harmonize results by design across projects.
scientific-software-diary
UCLA_training
djarecka's Repositories
djarecka/reproschema
A standardized form generation and data collection schema to harmonize results by design across projects.
djarecka/brainkbdocs
BrainKB Documentation
djarecka/BrainKit
Brain Knowledge Interaction Toolkit
djarecka/cell-annotation-schema
General, open-standard schema for cell annotations
djarecka/dandi-project-related-works
djarecka/dandischema
Schemata for DANDI archive project
djarecka/metadata-schemas
A repository for BICAN metadata schemas and their development.
djarecka/models
data models using linkML (yaml files only)
djarecka/models_tests
djarecka/nipype_tutorial
Learn Nipype with these tutorial notebooks - go here to see them online -->
djarecka/reproschema-library
djarecka/reproschema-py
djarecka/schemasheets
Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats
djarecka/shell
My fork
djarecka/shell1
My fork
djarecka/shell11
My fork
djarecka/shell6
My fork
djarecka/shell8
My fork
djarecka/simple2_NIDM_examples
ReproNim simple2 NIDM files for ABIDE/ADHD200 available from datalad
djarecka/skills-code-with-codespaces
My clone repository
djarecka/skills-introduction-to-github
My clone repository
djarecka/skills-test-with-actions
My clone repository
djarecka/skills_1-introduction-to-github
My clone repository
djarecka/test1_bsw_bash
My clone repository
djarecka/test1_version-control-systems
My clone repository
djarecka/test2_bsw_bash
My clone repository
djarecka/test3_bsw_bash
My clone repository
djarecka/test_gcloud
djarecka/tmp_skills-code-with-codespaces
My clone repository
djarecka/version-control-systems
My clone repository