Pinned Repositories
abc_atlas_access
Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas
abc_datalad
abide-pydra
Use pydra to run fmriprep on a SLURM cluster
afni
Official AFNI source and documentation
mit_diary
neuroML
A set of notebooks to introduce neuroscientists to concepts in machine learning.
pycontest
reproschema
A standardized form generation and data collection schema to harmonize results by design across projects.
scientific-software-diary
UCLA_training
djarecka's Repositories
djarecka/abc_atlas_access
Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas
djarecka/abc_datalad
djarecka/fmriprep-fake
djarecka/anndata
Annotated data.
djarecka/babs
BIDS-App Bootstrap (BABS)
djarecka/dandi.github.io
Website code for DANDI Project
djarecka/dandi_llms
djarecka/demo-protocol
an example protocol which serves as default protocol in schema-ui
djarecka/example-notebooks
djarecka/kerchunk
Cloud-friendly access to archival data
djarecka/linkml
Linked Open Data Modeling Language
djarecka/Metadata-Huddle-2023
djarecka/neurodocker
Generate Docker images with neuroimaging packages
djarecka/nipype2pydra
Scripts for importing workflows written in Nipype to the Pydra dataflow engine syntax
djarecka/pydra
a new engine
djarecka/pydra-fsl
djarecka/pydra-ml
djarecka/pydra-tutorial
Pydra tutorial
djarecka/reproschema-ui
UI to render ReproSchema based protocols and assessments.
djarecka/template-template
<<Not a course>> A template to make course templates. Search and replace "TBD".
djarecka/TheWay
Boilerplate scripts for running workflows on Penn clusters
djarecka/tmp_blog_test
djarecka/tmp_blog_test_githubio
djarecka/tmp_gatsby_auth0
djarecka/tmp_gatsby_auth0_1
djarecka/tmp_jason-auth0
djarecka/tmp_jason-auth0-gh
djarecka/tmp_repro_test
djarecka/tmp_yibei-demo-protocol
djarecka/tut3_wellness_netlify