Pinned Repositories
2018
applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2018
awesome-programming-books
📚 A curated list of awesome programming books
Best-Analysis-Practices-Talk
github_handson_mansuylab
Providing hands on git and GitHub training to people from the Mansuy lab
IntroToMachineLearning
Material for the [BC]2 2019 workshop "Introduction to Machine Learning: opportunities for advancing omics data analysis"
learndrake
An R package that teaches drake
material
Links to materials for STA 426 Fall Semester 2018
posterdown
Use RMarkdown to generate PDF Conference Posters via HTML
sperm_GSE162112
Re analysis of data from https://doi.org/10.1016/j.isci.2021.102870
dktanwar's Repositories
dktanwar/github-issue-templates
:symbols: A collection of GitHub issue and pull request templates
dktanwar/single-cell-training
Website hosted at https://sib-swiss.github.io/single-cell-training/latest/
dktanwar/ssubmit
Submit sbatch jobs without the need to create a script
dktanwar/isopret
Isoform function prediction and interpretation
dktanwar/personal_website2
My personal website
dktanwar/genomic-data-visualization
Course website for Genomic Data Visualization
dktanwar/DMRichR
A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
dktanwar/targets
Function-oriented Make-like declarative workflows for R
dktanwar/PhD_thesis
PhD thesis and summary of meetings
dktanwar/sydney_xaringan
University of Sydney theme for xaringan (remark.js)
dktanwar/posterdown
Use RMarkdown to generate PDF Conference Posters via HTML
dktanwar/online-cv
A minimal Jekyll Theme to host your resume (CV)
dktanwar/JohnHopkinsDataScience
My Code Repository for Coursera Data Science Specialization by John Hopkins University
dktanwar/sperm_GSE162112
Re analysis of data from https://doi.org/10.1016/j.isci.2021.102870
dktanwar/simulated_sperm_GSE162112
Simulated reads for testing shortRNA (10.1016/j.isci.2021.102870)
dktanwar/sperm_GSE50132
Re-analysis of data from https://doi.org/10.1038/nn.3695
dktanwar/mPFC_MSUS
Re-analysis of RNA-seq data from https://doi.org/10.1038/s41386-020-0727-7
dktanwar/GSE75323_reanalysis
Reanalysis of data from https://doi.org/10.1016/j.devcel.2015.11.024
dktanwar/trackplot
Generate IGV style locus tracks from bigWig files in R
dktanwar/dmr-comparison
Comparing different methods for finding DMRs. This is an extension to https://github.com/dktanwar/sta426-project-dmr-comparison/
dktanwar/bibtex-tidy
Cleaner and Formatter for BibTeX files
dktanwar/stats_notes
dktanwar/workflowr_tutorial
dktanwar/ssc
dktanwar/cv-1
My CV built using RMarkdown, the pagedown package and Nick Strayer's code.
dktanwar/github_handson_mansuylab
Providing hands on git and GitHub training to people from the Mansuy lab
dktanwar/heterochromatin
Scripts to analyze chromatin immunoprecipitation data
dktanwar/intro_to_git
dktanwar/git-fat
`git-fat` python3
dktanwar/git-tutorial
Short Git tutorial ("5 minute Git") - Get started with GitHub Desktop and the command line