dnbaker/dashing2

Issues

• dashing2 sketch --parse-by-seq doesn't work with --save-kmers

  #84 opened 8 months ago by CodeSteph
  0

• Silicon/M1/M2/arm64?

  #65 opened 2 years ago by gaboentropy
  5

• Sketching/comparing never completes on specific Fasta file

  #82 opened a year ago by matnguyen
  4

• Expected memory usage

  #80 opened a year ago by matnguyen
  4

• Multi-fasta functionality

  #79 opened a year ago by matnguyen
  3

• Segmentation fault error

  #77 opened a year ago by kaysahu
  1

• please allow builds without recursive cloning

  #76 opened a year ago by joelb123
  1

• compilation fails under gcc > 12

  #75 opened a year ago by joelb123
  1

• `sketch -L` doesn't work

  #59 opened a year ago by BenLangmead
  1

• dashing2 for metagenome

  #71 opened 2 years ago by jianshu93
  1

• Please include license file

  #73 opened a year ago by joelb123
  1

• --outprefix option and cmp subcommand are invaild

  #68 opened 2 years ago by XiaomingXu1995
  7

• Differences in mash distances between dashing2 vs dashing1/mash

  #63 opened 2 years ago by tsp-kucbd
  6

• dartminhash implenmentation

  #67 opened 2 years ago by jianshu93
  3

• What are the units for `--countmin-size`?

  #57 opened 2 years ago by BenLangmead
  1

• Specifying `--verbose` tends to give segmentation fault

  #60 opened 2 years ago by BenLangmead
  2

• aminoacid distance to AAI?

  #58 opened 2 years ago by jianshu93
  2

• Print cardinality estimate

  #55 opened 2 years ago by BenLangmead
  0

• no dashing2 cmp help info

  #51 opened 3 years ago by jianshu93
  2

• ARM neon support.

  #50 opened 3 years ago by jianshu93
  1

• large Metagenome comparison bad_alloc

  #49 opened 3 years ago by jianshu93
  2

• support for proteome? but not just genome in nt

  #36 opened 3 years ago by jianshu93
  18

• how to get assymetric matrix for containment index?

  #47 opened 3 years ago by dejsha
  2

• --mash-distance outputs similarity with --set option

  #45 opened 3 years ago by dejsha
  3

• matrix wrong format (?)

  #27 opened 3 years ago by gaboentropy
  4