Pinned Repositories
bacpaq
Bacterial Genomics workflow for short(Illumina) and long-read (Oxford Nanopore) sequencing data
ontotrek
A 3d ontology visualizer focusing on OBOFoundry.org ontologies
dOCtoR
OCR Android Application for nwhacks 2018
matnguyen.github.io
My Personal Website
MindPath
An Interactive Exploratory Resources Hub for Mental Health
STAT520A-Bayesian-Variant-Risk-Project
FFPolish
mutation_rainstorm
Compute points for a cohort-wide variation on rainfall plots ("rainstorms") and identify mutation peaks
NGSweep
Matthew's pipeline for preprocessing NGS data
PathOGiST
This repository contains the pipeline for the multi-criterion genomic analysis of bacterial pathogens
matnguyen's Repositories
matnguyen/dOCtoR
OCR Android Application for nwhacks 2018
matnguyen/matnguyen.github.io
My Personal Website
matnguyen/MindPath
An Interactive Exploratory Resources Hub for Mental Health
matnguyen/STAT520A-Bayesian-Variant-Risk-Project
matnguyen/bam-readcount
count DNA sequence reads in BAM files
matnguyen/BIOF501A-snakemake
SARS-CoV-2 Genome and Spike Protein Phylogenetic Comparison Pipeline
matnguyen/Calculator-CMPT276
matnguyen/CMPT459-PRJ
matnguyen/covizu
Rapid analysis and visualization of coronavirus genome variation
matnguyen/Cryptopals-Crypto-Challenges
http://cryptopals.com/
matnguyen/DeepSVR
matnguyen/FFPE
FFPE Variant calling plots
matnguyen/HGTector
HGTector2: Genome-wide prediction of horizontal gene transfer based on distribution of sequence homology patterns.
matnguyen/irida
Canada’s Integrated Rapid Infectious Disease Analysis Platform for Genomic Epidemiology
matnguyen/MentaLiST
The MLST pipeline developed by the PathOGiST research group
matnguyen/mutation_rainstorm
Compute points for a cohort-wide variation on rainfall plots ("rainstorms") and identify mutation peaks
matnguyen/pipelines
Collection of standard analytical pipelines for genomic and transcriptomic data
matnguyen/Rosalind
http://rosalind.info/problems/locations/
matnguyen/snp-dists
Pairwise SNP distance matrix from a FASTA sequence alignment
matnguyen/SpoTyping
matnguyen/STAT538A-Dementia-Project
matnguyen/Tokimon-CMPT276
matnguyen/wGPA-calculator
Weighted GPA calculator for Canadian Medical Schools