dnchenchen

dnchenchen's Stars

• Tyrrrz/YoutubeDownloader

  Downloads videos and playlists from YouTube

  Language:C#7.5k1.1k

• Teddy-XiongGZ/DeepGSEA

  Language:Python121

• jcao89757/SCINA

  SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples

  Language:R5518

• omicsCore/scTyper

  scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data

  Language:HTML269

• bioinfo-ibms-pumc/SCSA

  SCSA: cell type annotation for single-cell RNA-seq data

  Language:Python7915

• cozygene/bisque

  An R toolkit for estimation of cell composition from bulk expression data

  Language:R6820

• google-deepmind/alphafold

  Open source code for AlphaFold.

  Language:Python12.2k2.2k

• ftwkoopmans/goat

  GOAT: efficient and robust identification of gene set enrichment

  Language:R6

• mvab/mendelian-randomization-breast-cancer

  Analysis workflow for MRC-IEU PhD mini-project on childhood BMI effect on breast cancer

  Language:R7123

• MareesAT/GWA_tutorial

  A comprehensive tutorial about GWAS and PRS

  792318

• al2na/methylKit

  R package for DNA methylation analysis

  Language:R19696

• Rdatatable/data.table

  R's data.table package extends data.frame:

  Language:R3.5k966

• compgenomics/MeTDiff

  Language:R121

• rheinbaylab/LOY_in_primary_tumors

  Code accompanying LOY manuscript

  Language:Jupyter Notebook51

• broadinstitute/ssGSEA2.0

  Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)

  Language:R22877

• jason-weirather/CIBERSORT

  A shell to facilitate loading / running CIBERSORT software in structured environments

  Language:Python257

• TommyZihao/zihao_course

  同济子豪兄的公开课

  1.4k176

• NVIDIA-Genomics-Research/rapids-single-cell-examples

  Examples of single-cell genomic analysis accelerated with RAPIDS

  Language:Jupyter Notebook31268

• gokceneraslan/awesome-deepbio

  A curated list of awesome deep learning applications in the field of computational biology

  1.9k315

• cole-trapnell-lab/monocle3

  Language:R32298

• kundajelab/bpnet

  Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them

  Language:Jupyter Notebook13832

• calico/basenji

  Sequential regulatory activity predictions with deep convolutional neural networks.

  Language:Python387120

• WZMIAOMIAO/deep-learning-for-image-processing

  deep learning for image processing including classification and object-detection etc.

  Language:Python21.9k7.8k

• ljpzzz/machinelearning

  My blogs and code for machine learning. http://cnblogs.com/pinard

  Language:Jupyter Notebook8.2k3.7k

• ShusenTang/Dive-into-DL-PyTorch

  本项目将《动手学深度学习》(Dive into Deep Learning)原书中的MXNet实现改为PyTorch实现。

  Language:Jupyter Notebook18.1k5.4k

• funkyheatmap/funkyheatmap

  Visualising data frames as funky heatmaps 📊

  Language:R15610

• YangJianshun/LINKVIEW2

  DNA序列比对结果 可视化展示工具

  Language:TypeScript416

• xiaolilaoli/lihongyi2022homework

  李宏毅2022作业专题

  Language:Jupyter Notebook87

• chuiqin/irGSEA

  The integration of single cell rank-based gene set enrichment analysis

  Language:R9917

• simonorozcoarias/Inpactor2

  Inpactor2: LTR retrotransposon detector and classificator using Deep Learning

  Language:Jupyter Notebook174