Dockstore
Support organization for dockstore file provisioning plugins and other useful code
Toronto, Ontario
Pinned Repositories
batch_wrapper
This Docker container is used to demonstrate the ability to run Dockstore tools and workflows in online batch services such as AWS Batch and Azure Batch.
compose_setup
Demonstrate how to setup and run Dockstore using composed containers
cwlavro
Auto-generated Avro classes for manipulating CWL (starting with Java). Works with v1.0
dockstore
An app store for scientific workflows, tools, notebooks, and services
dockstore-cli
Command-line interface to dockstore, split out from main repo in version 1.8.0
dockstore-documentation
The documentation for Dockstore.org
dockstore-load-tester
Dockstore Load/Performance/Stress Tester
dockstore-ui
AngularJS UI for the Dockstore Web Service superceded by https://github.com/dockstore/dockstore-ui2
dockstore-ui2
Website user interface for Dockstore in Angular2
lambda
Till we find a better solution, backup and document AWS lambdas
Dockstore's Repositories
dockstore/dockstore
An app store for scientific workflows, tools, notebooks, and services
dockstore/dockstore-ui2
Website user interface for Dockstore in Angular2
dockstore/cwlavro
Auto-generated Avro classes for manipulating CWL (starting with Java). Works with v1.0
dockstore/dockstore-cli
Command-line interface to dockstore, split out from main repo in version 1.8.0
dockstore/dockstore-load-tester
Dockstore Load/Performance/Stress Tester
dockstore/bcc2020-training
Training materials for our BCC 2020 training workshop.
dockstore/dockstore-documentation
The documentation for Dockstore.org
dockstore/compose_setup
Demonstrate how to setup and run Dockstore using composed containers
dockstore/dockstore-support
A collection of different projects supporting the dockstore initiative
dockstore/gs-plugin
Dockstore Google Cloud Storage file provisioning plugin
dockstore/lambda
Till we find a better solution, backup and document AWS lambdas
dockstore/.github
default community health files
dockstore/dockstore-snakemake-interface
Dockstore Plugin for Snakemake Workflows
dockstore/dockstore-trs-notebook
This repository contains a notebook demonstrating how to use TRS.
dockstore/example-notebook
This repository contains a simple notebook example from Jupyter for running code.
dockstore/extra-content
A repo for external content, such as featured content
dockstore/hubflow
A copy of hubflow for safe-keeping
dockstore/icgc-get-plugin
Dockstore icgc get file provisioning plugin
dockstore/icgc-storage-client-plugin
icgc storage client file provisioning plugin
dockstore/maintenance-downtime-content
dockstore/ng2-ui-auth
an angular2 repository for authentication based on angular1's satellizer
dockstore/orcid-model
Container for all classes that will be used to marshal and unmarshal XML/JSON from the API
dockstore/swagger-java-bitbucket-client
swagger-java-bitbucket-client
dockstore/swagger-java-discourse-client
swagger-java-discourse-client
dockstore/swagger-java-quay-client
swagger-java-quay-client
dockstore/swagger-java-sam-client
swagger-java-sam-client
dockstore/swagger-java-zenodo-client
swagger-java-zenodo-client
dockstore/tool-registry-service-schemas
APIs for discovering genomics tools, their metadata and their containers
dockstore/workflow-actions
Resuable github actions (unfortunately called workflows)
dockstore/zenodo-client
A generated client for zenodo using a swagger (soon be openAPI) description