Dockstore
Support organization for dockstore file provisioning plugins and other useful code
Toronto, Ontario
Pinned Repositories
batch_wrapper
This Docker container is used to demonstrate the ability to run Dockstore tools and workflows in online batch services such as AWS Batch and Azure Batch.
compose_setup
Demonstrate how to setup and run Dockstore using composed containers
cwlavro
Auto-generated Avro classes for manipulating CWL (starting with Java). Works with v1.0
dockstore
An app store for scientific workflows, tools, notebooks, and services
dockstore-cli
Command-line interface to dockstore, split out from main repo in version 1.8.0
dockstore-documentation
The documentation for Dockstore.org
dockstore-load-tester
Dockstore Load/Performance/Stress Tester
dockstore-ui
AngularJS UI for the Dockstore Web Service superceded by https://github.com/dockstore/dockstore-ui2
dockstore-ui2
Website user interface for Dockstore in Angular2
lambda
Till we find a better solution, backup and document AWS lambdas
Dockstore's Repositories
dockstore/dockstore-ui
AngularJS UI for the Dockstore Web Service superceded by https://github.com/dockstore/dockstore-ui2
dockstore/batch_wrapper
This Docker container is used to demonstrate the ability to run Dockstore tools and workflows in online batch services such as AWS Batch and Azure Batch.
dockstore/app-support-prototype
A place to explore how we might support "apps" in Dockstore. These are long-running, interactive web services rather than batch workflows.
dockstore/checker-WDL-templates
Templates for checker WDLs.
dockstore/synapse-plugin
Dockstore Synapse file provisioning plugin
dockstore/write_api_service
Implementation of tool-registry-schema with experimental write API support
dockstore/data-object-service-plugin
Dockstore Data Object Service file provisioning plugin
dockstore/datatable-server
A sandbox repo for testing server-side processing of data tables on dockstore-ui
dockstore/dockstore-training
Working space for creating dockstore training materials
dockstore/docktesters-archive
Testing out an archive for the docktesters mailing list
dockstore/hello_world
This is a tutorial
dockstore/HubFlow-Site
A clone of http://datasift.github.io/gitflow/ created by Datasift - Sanitized of Facebook hooks and branding for general audiences, also ported to Node.js/Gulp/Angular/Less dev environment
dockstore/icgc-storage-client-plugin
icgc storage client file provisioning plugin
dockstore/noop-plugin
For testing
dockstore/one-workflow-many-ways
Implementing bamqc over and over again
dockstore/phylowgs
Application for inferring subclonal composition and evolution from whole-genome sequencing data.
dockstore/s3-plugin
Dockstore S3 file provisioning plugin
dockstore/testing-hubflow
A repository for testing branch protection rules and hubflow
dockstore/titan_workflow
KRONOS workflow for TITAN pipeline
dockstore/wdl-bamstats
WDL-only version of bamstats