/RNAtools

RNAseq scripts

Primary LanguageR

RNAtools

RNAseq scripts.

Type --help to see the usage of scripts, e.g.

Rscript Volcano.R --help

Requirements
R >= 4.0

  • AnnotationDbi
  • argparse
  • biomaRt
  • ComplexHeatmap
  • DESeq2
  • GenomicFeatures
  • ggrepel
  • KEGGREST
  • org.Hs.eg.db
  • this.path
  • tidyverse
  • tximport
  • viridis