dpastling/plethora

Issues

• 2_batch_make_bed.sh span[hosts=1]

  #10 opened 7 years ago by IleaHeft
  2

• 3_clean_files.pl

  #7 opened 7 years ago by IleaHeft
  1

• Update to work with most recent version of bedtools

  #9 opened 7 years ago by dpastling
  1

• Update to work with most recent version of samtools

  #8 opened 7 years ago by dpastling
  1

• trim_analysis.R

  #11 opened 7 years ago by IleaHeft
  1

• 4_batch_gc_correction.sh error

  #6 opened 8 years ago by IleaHeft
  3

• 4_batch_gc_correction.sh bed file reference

  #5 opened 8 years ago by IleaHeft
  1

• GC correction script name issue

  #4 opened 8 years ago by IleaHeft
  0

• max insert size needs to be moved to config file in bowtie2 script

  #3 opened 8 years ago by dpastling
  1

• the max insert size could be estimated within parse_bed.pl

  #2 opened 8 years ago by dpastling
  1

• download script does not throw error for missing samples

  #1 opened 8 years ago by dpastling
  0