e-sollier

DKFZHeidelberg

Pinned Repositories

COMPASS
Language:C++21 6 1710
figeno
Tool for plotting sequencing data along genomic coordinates.
Language:Python257 6 228
pyjacker
Enhancer hijacking detection using WGS + RNA-seq
Language:Python2 1 01
wf_WGS
Nextflow workflow to process WGS data
Language:Python4 1 00
ascat
ASCAT copy number R package
Language:R0 1 00
Bourque_Distances
We include a set of C++ programs for computing Bourque distances and other existing distance measures for label trees.
Language:C0 1 00
fast_ase
Get allelic read counts from RNA-seq data, for loci heterozygous in DNA-seq data
Language:Rust1 1 00
filedialpy
Language:Python6 1 00
Graph-Classification-with-TDA
Language:Jupyter Notebook4 2 03
SCRITE
Language:Jupyter Notebook2 2 00

e-sollier's Repositories

e-sollier/filedialpy
Language:Python6 1 00
e-sollier/Graph-Classification-with-TDA
Language:Jupyter Notebook4 2 03
e-sollier/SCRITE
Language:Jupyter Notebook2 2 00
e-sollier/fast_ase
Get allelic read counts from RNA-seq data, for loci heterozygous in DNA-seq data
Language:Rust1 1 00
e-sollier/ascat
ASCAT copy number R package
Language:R0 1 00
e-sollier/Bourque_Distances
We include a set of C++ programs for computing Bourque distances and other existing distance measures for label trees.
Language:C0 1 00
e-sollier/COMPASS
Language:C++0 0 00
e-sollier/DL2020
Language:Jupyter Notebook04
e-sollier/e-sollier.github.io
Language:HTML
e-sollier/modkit
A bioinformatics tool for working with modified bases
Language:Rust0 0
e-sollier/NSForest
Language:Jupyter Notebook1 0
e-sollier/persim
Distances and representations of persistence diagrams
Language:Python
e-sollier/scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
Language:Python1 0
e-sollier/scRNAseq-pancreas
Language:Python1 0
e-sollier/ShatterSeek
Language:TeX
e-sollier/wf-human-variation
Language:Nextflow
e-sollier/whatshap
Read-based phasing of genomic variants, also called haplotype assembly
Language:Python0 0