/cobra_utils

Utility to simplify obtaining information from genome-scale models as well as their manipulation. This implementation is available only for working with COBRApy.

Primary LanguageJupyter NotebookMIT LicenseMIT

COBRA utils

PyPI version DOI

This is a series of utilities to use together with COBRApy. The goal of this tool is to make easier the usage of COBRApy.

Installation

To install this package from a Unix OS, run:

pip install cobra-utils

To install this package from Windows, run:

python -m pip install cobra-utils

In case you downloaded the source code, in a Unix OS run:

pip install -e .

or in Windows:

python -m pip install -e .

Examples