/shell-polymer

Primary LanguageC++MIT LicenseMIT

Description

Brownian dynamics code to simulate polymeric shell + interior polymer model of cell nucleus as in Refs [1-3].

Dependencies
boost C++ library (https://www.boost.org/)

References

[1] AD Stephens, EJ Banigan, SA Adam, RD Goldman, JF Marko, Mol. Biol. Cell 28:1984 (2017).

[2] EJ Banigan, AD Stephens, JF Marko, Biophys. J. 113:1654 (2017). (also available as bioRxiv 197566)

[3] AR Strom, RJ Biggs, EJ Banigan, X Wang, K Chiu, C Herman, J Collado, F Yue, JC Ritland Politz, LJ Tait, D Scalzo, A Telling, M Groudine, CP Brangwynne, JF Marko, AD Stephens, eLife 10:e63972 (2021).