Reversed start and end of BND

[charliechen912ilovbash]

If the start and end of two BND, i.e. translocation, are reversed, does it means they are actually the same translocation event?
E.g.

id            start                end
TRA-1:   chr1,         1,    chr2,   100
TRA-2:   chr2,   100,   chr1,         1  

[jakob-he]

Hi @charliechen912ilovbash

Yes, in this case the two breakends represent the same translocation.
Since SVIM returns the breakend locations rather than just one translocation event, both breakends are reported.

Best,
Jakob