Pinned Repositories
assembly_sv_calling_evaluation
bioconda-recipes
Conda recipes for the bioconda channel.
hal2vg
Convert HAL to VG
iGenVar
The official repository for the iGenVar project.
pac_bam_scan
pibeta
ssHMM
ssHMM is an RNA motif finder. It recovers sequence-structure motifs from RNA-binding protein data, such as CLIP-Seq data.
svim
Structural Variant Identification Method using Long Reads
svim-asm
Structural Variant Identification Method using Genome Assemblies
sv-genotyping-paper
eldariont's Repositories
eldariont/svim
Structural Variant Identification Method using Long Reads
eldariont/svim-asm
Structural Variant Identification Method using Genome Assemblies
eldariont/ssHMM
ssHMM is an RNA motif finder. It recovers sequence-structure motifs from RNA-binding protein data, such as CLIP-Seq data.
eldariont/assembly_sv_calling_evaluation
eldariont/bioconda-recipes
Conda recipes for the bioconda channel.
eldariont/hal2vg
Convert HAL to VG
eldariont/iGenVar
The official repository for the iGenVar project.
eldariont/pac_bam_scan
eldariont/pibeta
eldariont/real_sv_calling_evaluation
A snakemake pipeline for SV calling evaluation from long read sequencing
eldariont/seqan
SeqAn's official repository.
eldariont/seqan3
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
eldariont/sv-benchmark
Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data
eldariont/SViper
Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.
eldariont/vcflib
a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
eldariont/vg
tools for working with genome variation graphs
eldariont/wgasv
Scripts for studying SVs via graphs constructed from whole-genome-alignment
eldariont/yeast_sv
Pipelines for SV genotyping using vgteam/vg on 12 yeast strains