eldariont/svim-asm

Issues

• How can I get the end position of a translocation?

  #27 opened 3 months ago by qizhengyang2017
  0

• Option to output insertion/deletion coordinates in query sequence?

  #22 opened 2 years ago by cizydorczyk
  1

• Parameters for long SV detection

  #26 opened a year ago by MariosGvr
  0

• Sequence "X" not present

  #25 opened a year ago by RenscoHogers
  1

• How to interpret when Tandem duplications are filtered "not_fully_covered"?

  #24 opened a year ago by cherryCookies
  0

• svim-asm on multiple samples

  #9 opened 3 years ago by dfguan
  4

• Output a contig-size large SV

  #23 opened a year ago by hangsuUNC
  0

• Multiple records in the same position

  #15 opened 3 years ago by zhqduan
  1

• identify quite different SVs from two software

  #21 opened 2 years ago by aaannaw
  0

• quality and sequence mismatch

  #10 opened 3 years ago by masen1991
  9

• error: CIGAR length too long at position 1

  #8 opened 3 years ago by atongsa
  5

• Any option to keep the signature/internal results?

  #20 opened 2 years ago by LYC-vio
  0

• QUAL filtering

  #19 opened 2 years ago by RasmusBuntzen
  0

• Upper limit of the SV length

  #18 opened 3 years ago by MehmetGoktay
  1

• Issues of calling from lra alignments

  #17 opened 3 years ago by jiadong324
  0

• No Duplications output

  #16 opened 3 years ago by hhuili
  0

• Query genome positions

  #14 opened 3 years ago by Murukarthick
  0

• Phased genotype in VCF?

  #12 opened 3 years ago by hsiehph
  2

• Calling SNPs with svim-asm?

  #13 opened 3 years ago by cgroza
  1

• Co-ordinates of break in query genome

  #11 opened 3 years ago by burnsro
  2

• -r2k

  #7 opened 3 years ago by atongsa
  1

• can SVIM-asm used for polyploid assembly

  #2 opened 4 years ago by zhen0506
  5

• Low number of interspersed duplications?

  #6 opened 4 years ago by GuillaumeHolley
  1

• OverflowError: value too large to convert to uint32_t

  #5 opened 4 years ago by jxlabWzZ
  10

• svim-asm for bacterial genome

  #4 opened 4 years ago by rthapa1
  1

• MAF alignments format

  #3 opened 4 years ago by biozzq
  1

• using more than 64G RAM

  #1 opened 4 years ago by cschin
  3