/ga4gh-variant-sim

Simulations for benchmarking large-scale variant stores

Primary LanguagePythonMIT LicenseMIT

ga4gh-variant-sim

Simulations for benchmarking large-scale variant stores

The Python code for running simulations and conversion to VCF is in the simulator.py script in this directory.

Code for running specific benchmarks and comparisons across different formats is in the data directory.