enormandeau/stacks_workflow

./00-scripts/01_cutadapt.sh: line 24: parallel: command not found

laaryjc opened this issue · 1 comments

Hi, thanks for the great tutorial. however, when i run cutadapt.sh, i get,

[laaryjc@localhost stacks_workflow]$ ./00-scripts/01_cutadapt.sh 5
./00-scripts/01_cutadapt.sh: line 24: parallel: command not found

can you help me with this error? thx

I'll close this myself, I did not have Parallel installed. you can get it via
(sudo) apt-get install parallel
or if yo uhave CentOS
(sudo) yum install parallel